CircNet

General Information

circRNA Basic Information

CircID	chr4:174259806\|174262944
Strand	-
CircType	exon
Host Gene	ENSG00000164117.11;
Algorism	CIRI2;
Sequence	CCCAAGTGGATTTGCACAACCCTTGCCAGAGAAGTTCATCATTCGCAAGGTCCTGCCAAACACATGAAGCCAAGCAAAGGTCAGTTGCATTCAGGTAGGACAAGATGGTAAAGCTTAGCTCAGGAGGCAACATTTCCAAATTAATGAATCCTTCCTGTTCTTTCGATTTCCTTGCCTTCAAAAGATGATATATGTCAATGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr4:174259806\|174262944	hsa-miR-19a-5p	0	1
chr4:174259806\|174262944	hsa-miR-19a-3p	0	1
chr4:174259806\|174262944	hsa-miR-31-5p	0	1
chr4:174259806\|174262944	hsa-miR-31-3p	0	1
chr4:174259806\|174262944	hsa-miR-96-5p	0	1
chr4:174259806\|174262944	hsa-miR-96-3p	0	1
chr4:174259806\|174262944	hsa-miR-182-5p	0	1
chr4:174259806\|174262944	hsa-miR-182-3p	0	1
chr4:174259806\|174262944	hsa-miR-326	0	1
chr4:174259806\|174262944	hsa-miR-489-5p	0	1
chr4:174259806\|174262944	hsa-miR-489-3p	0	1
chr4:174259806\|174262944	hsa-miR-610	0	1
chr4:174259806\|174262944	hsa-miR-1271-5p	0	1
chr4:174259806\|174262944	hsa-miR-1271-3p	0	1
chr4:174259806\|174262944	hsa-miR-891b	0	1
chr4:174259806\|174262944	hsa-miR-942-5p	0	1
chr4:174259806\|174262944	hsa-miR-942-3p	0	1
chr4:174259806\|174262944	hsa-miR-1200	0	1
chr4:174259806\|174262944	hsa-miR-1286	0	1
chr4:174259806\|174262944	hsa-miR-1272	0	1
chr4:174259806\|174262944	hsa-miR-296-3p	0	1
chr4:174259806\|174262944	hsa-miR-409-3p	0	1
chr4:174259806\|174262944	hsa-miR-1207-5p	0	1
chr4:174259806\|174262944	hsa-miR-330-5p	0	1
chr4:174259806\|174262944	hsa-miR-664	0	1
chr4:174259806\|174262944	hsa-miR-19b	0	1
chr4:174259806\|174262944	hsa-miR-646	1	0
chr4:174259806\|174262944	hsa-miR-4533	1	0
chr4:174259806\|174262944	hsa-miR-1301-3p	1	0
chr4:174259806\|174262944	hsa-miR-4763-3p	1	0
chr4:174259806\|174262944	hsa-miR-1249-5p	1	0
chr4:174259806\|174262944	hsa-miR-6797-5p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:174259806\|174262944
ORF Type	ORF1
Protein Length	28
Nucleotide Length	87
Protein Sequence	MHNPCQRSSSFARSCQTHEAKQRSVAFR
Nucleotide Sequence	TTGCACAACCCTTGCCAGAGAAGTTCATCATTCGCAAGGTCCTGCCAAACACATGAAGCCAAGCAAAGGTCAGTTGCATTCAGGTAG

CircID	chr4:174259806\|174262944
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MVKLSSGGNISKLMNPSCSFDFLAFKR
Nucleotide Sequence	ATGGTAAAGCTTAGCTCAGGAGGCAACATTTCCAAATTAATGAATCCTTCCTGTTCTTTCGATTTCCTTGCCTTCAAAAGATGA

CircID	chr4:174259806\|174262944
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MQLTFAWLHVFGRTLRMMNFSGKGCANPLG
Nucleotide Sequence	ATGCAACTGACCTTTGCTTGGCTTCATGTGTTTGGCAGGACCTTGCGAATGATGAACTTCTCTGGCAAGGGTTGTGCAAATCCACTTGGG

CircID	chr4:174259806\|174262944
ORF Type	ORF4
Protein Length	60
Nucleotide Length	180
Protein Sequence	MKARKSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTW
Nucleotide Sequence	TTGAAGGCAAGGAAATCGAAAGAACAGGAAGGATTCATTAATTTGGAAATGTTGCCTCCTGAGCTAAGCTTTACCATCTTGTCCTACCTGAATGCAACTGACCTTTGCTTGGCTTCATGTGTTTGGCAGGACCTTGCGAATGATGAACTTCTCTGGCAAGGGTTGTGCAAATCCACTTGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information