CircNet

General Information

circRNA Basic Information

CircID	chr4:17628055\|17628243
Strand	+
CircType	exon
Host Gene	ENSG00000118579.10;
Algorism	CIRI2;
Sequence	TCGTTTTAACCAGCAGAAGGATGTTTGGTATTTTGTGAGTGGTAAACTGACCTTGAATTTTCTTTGTACGTGCTTAGACAAAATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTATGTCCAACAGGAGAATGGCATGACCGAACAGTGTTGTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:17628055\|17628243	hsa-miR-212-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-212-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-223-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-223-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-132-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-132-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-141-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-141-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-200a-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-200a-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-593-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-593-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-1237-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-1237-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-1208	0	0	1
chr4:17628055\|17628243	hsa-miR-1248	0	0	1
chr4:17628055\|17628243	hsa-miR-1266-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-1266-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-524-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-590-3p	0	0	1
chr4:17628055\|17628243	hsa-miR-520d-5p	0	0	1
chr4:17628055\|17628243	hsa-miR-138	0	0	1
chr4:17628055\|17628243	hsa-miR-549	0	0	1
chr4:17628055\|17628243	hsa-miR-3972	1	0	0
chr4:17628055\|17628243	hsa-miR-146a-3p	0	1	0
chr4:17628055\|17628243	hsa-miR-3692-5p	0	1	0
chr4:17628055\|17628243	hsa-miR-6868-3p	0	1	0
chr4:17628055\|17628243	hsa-miR-4798-3p	0	1	0
chr4:17628055\|17628243	hsa-miR-5189-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:17628055\|17628243
ORF Type	ORF1
Protein Length	41
Nucleotide Length	126
Protein Sequence	MTLNFLCTCLDKIIKWFILSWPESNFGVGIQRLFMSNRRMA
Nucleotide Sequence	CTGACCTTGAATTTTCTTTGTACGTGCTTAGACAAAATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTATGTCCAACAGGAGAATGGCATGA

CircID	chr4:17628055\|17628243
ORF Type	ORF2
Protein Length	26
Nucleotide Length	78
Protein Sequence	MRATLGLAFRDCLCPTGEWHDRTVLS
Nucleotide Sequence	CTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTATGTCCAACAGGAGAATGGCATGACCGAACAGTGTTGTCA

CircID	chr4:17628055\|17628243
ORF Type	ORF3
Protein Length	45
Nucleotide Length	135
Protein Sequence	MPTPKLLSGHDKINHLIILSKHVQRKFKVSLPLTKYQTSFCWLKR
Nucleotide Sequence	ATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAATTTTGTCTAAGCACGTACAAAGAAAATTCAAGGTCAGTTTACCACTCACAAAATACCAAACATCCTTCTGCTGGTTAAAACGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information