CircRNA Information

General Information
circRNA Basic Information
CircID chr4:177430432|177430586
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CGCAAGTTTAAATCTGATTTTTTTCTTTTTCCAAGGCCCAGCACCAGGTTTAAGCAGGTTAGCATACCTCAGATAACCCTGGAGGAAGATTCCTTCTCTGAGAGTGTGAAGCTGTAGGGCTGCCATTAGTAGTTGCTAATTCCAGGTTTCAAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:177430432|177430586 hsa-let-7b-5p 0 0 1
chr4:177430432|177430586 hsa-let-7b-3p 0 0 1
chr4:177430432|177430586 hsa-let-7c-5p 0 0 1
chr4:177430432|177430586 hsa-let-7c-3p 0 0 1
chr4:177430432|177430586 hsa-let-7d-5p 0 0 1
chr4:177430432|177430586 hsa-let-7d-3p 0 0 1
chr4:177430432|177430586 hsa-let-7e-5p 0 0 1
chr4:177430432|177430586 hsa-let-7e-3p 0 0 1
chr4:177430432|177430586 hsa-miR-98-5p 0 0 1
chr4:177430432|177430586 hsa-miR-98-3p 0 0 1
chr4:177430432|177430586 hsa-let-7g-5p 0 0 1
chr4:177430432|177430586 hsa-let-7g-3p 0 0 1
chr4:177430432|177430586 hsa-let-7i-5p 0 0 1
chr4:177430432|177430586 hsa-let-7i-3p 0 0 1
chr4:177430432|177430586 hsa-miR-377-5p 0 0 1
chr4:177430432|177430586 hsa-miR-377-3p 0 0 1
chr4:177430432|177430586 hsa-miR-202-5p 0 0 1
chr4:177430432|177430586 hsa-miR-202-3p 0 0 1
chr4:177430432|177430586 hsa-miR-606 0 0 1
chr4:177430432|177430586 hsa-miR-619-5p 0 0 1
chr4:177430432|177430586 hsa-miR-619-3p 0 0 1
chr4:177430432|177430586 hsa-miR-649 0 0 1
chr4:177430432|177430586 hsa-miR-1252-5p 0 0 1
chr4:177430432|177430586 hsa-miR-1252-3p 0 0 1
chr4:177430432|177430586 hsa-miR-885-3p 0 0 1
chr4:177430432|177430586 hsa-miR-490-3p 0 0 1
chr4:177430432|177430586 hsa-miR-548c-3p 0 0 1
chr4:177430432|177430586 hsa-let-7a 0 0 1
chr4:177430432|177430586 hsa-let-7f 0 0 1
chr4:177430432|177430586 hsa-miR-1182 1 0 0
chr4:177430432|177430586 hsa-miR-1303 0 1 0
chr4:177430432|177430586 hsa-miR-3147 1 0 0
chr4:177430432|177430586 hsa-miR-378c 1 0 0
chr4:177430432|177430586 hsa-miR-3661 1 0 0
chr4:177430432|177430586 hsa-miR-378g 1 0 0
chr4:177430432|177430586 hsa-miR-4505 1 0 0
chr4:177430432|177430586 hsa-miR-4644 0 1 0
chr4:177430432|177430586 hsa-miR-9718 1 0 0
chr4:177430432|177430586 hsa-miR-12119 0 1 0
chr4:177430432|177430586 hsa-miR-5589-5p 1 0 0
chr4:177430432|177430586 hsa-miR-3614-5p 1 0 0
chr4:177430432|177430586 hsa-miR-6823-5p 0 1 0
chr4:177430432|177430586 hsa-miR-654-5p 1 0 0
chr4:177430432|177430586 hsa-miR-1250-5p 1 0 0
chr4:177430432|177430586 hsa-miR-6836-5p 1 0 0
chr4:177430432|177430586 hsa-miR-3187-5p 1 0 0
chr4:177430432|177430586 hsa-miR-6773-5p 1 0 0
chr4:177430432|177430586 hsa-miR-6855-5p 1 0 0
chr4:177430432|177430586 hsa-miR-4691-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr4:177430432|177430586
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MELATTNGSPTASHSQRRNLPPGLSEVC
Nucleotide Sequence CTGGAATTAGCAACTACTAATGGCAGCCCTACAGCTTCACACTCTCAGAGAAGGAATCTTCCTCCAGGGTTATCTGAGGTATGCTAA

CircID chr4:177430432|177430586
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MAALQLHTLREGIFLQGYLRYANLLKPGAGPWKKKKIRFKLA
Nucleotide Sequence ATGGCAGCCCTACAGCTTCACACTCTCAGAGAAGGAATCTTCCTCCAGGGTTATCTGAGGTATGCTAACCTGCTTAAACCTGGTGCTGGGCCTTGGAAAAAGAAAAAAATCAGATTTAAACTTGCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites