CircNet

General Information

circRNA Basic Information

CircID	chr4:1799254\|1799812
Strand	+
CircType	exon
Host Gene	ENSG00000068078.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAGTCCCGGGCCCAGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGGAGCTGAGCTGTCCCCCGCCCGGGGGTGGTCCCATGGGGCCCACTGTCTGGGTCAAGGATGGCACAGGGCTGGTGCCCTCGGAGCGTGTCCTGGTGGGGCCCCAGCGGCTGCAGGTGCTGAATGCCTCCCACGAGGACTCCGGGGCCTACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAGACGCTCCATCCTCGGGAGATGACGAAGACGGGGAGGACGAGGCTGAGGACACAGGTGTGGACACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:1799254\|1799812
ORF Type	ORF1
Protein Length	80
Nucleotide Length	240
Protein Sequence	MGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDT
Nucleotide Sequence	ATGGGGCCCACTGTCTGGGTCAAGGATGGCACAGGGCTGGTGCCCTCGGAGCGTGTCCTGGTGGGGCCCCAGCGGCTGCAGGTGCTGAATGCCTCCCACGAGGACTCCGGGGCCTACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAGACGCTCCATCCTCGGGAGATGACGAAGACGGGGAGGACGAGGCTGAGGACACAGGTGTGGACACA

CircID	chr4:1799254\|1799812
ORF Type	ORF2
Protein Length	83
Nucleotide Length	249
Protein Sequence	VAQYALREPLPAAVGPGVLVGGIQHLQPLGPHQDTLRGHQPCAILDPDSGPHGTTPGRGTAQLHSIPAAEDQLLLLAGLWARD
Nucleotide Sequence	GTGGCACAGTACGCGCTGCGTGAGCCGCTGCCGGCAGCTGTAGGCCCCGGAGTCCTCGTGGGAGGCATTCAGCACCTGCAGCCGCTGGGGCCCCACCAGGACACGCTCCGAGGGCACCAGCCCTGTGCCATCCTTGACCCAGACAGTGGGCCCCATGGGACCACCCCCGGGCGGGGGACAGCTCAGCTCCACAGCATCCCCGCTGCCGAAGACCAACTGCTCCTGCTGGCCGGGCTCTGGGCCCGGGAC

CircID	chr4:1799254\|1799812
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MGPPPGGGQLSSTASPLPKTNCSCWPGSGPGT
Nucleotide Sequence	ATGGGACCACCCCCGGGCGGGGGACAGCTCAGCTCCACAGCATCCCCGCTGCCGAAGACCAACTGCTCCTGCTGGCCGGGCTCTGGGCCCGGGACT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:1799254\|1799812	GTF2F1	9	11	0
chr4:1799254\|1799812	RBM5	2	0	0
chr4:1799254\|1799812	AARS	0	3	0
chr4:1799254\|1799812	MOV10	0	0	1
chr4:1799254\|1799812	FUS	2	3	1
chr4:1799254\|1799812	NCBP2	1	3	0
chr4:1799254\|1799812	AGGF1	0	1	0
chr4:1799254\|1799812	SF3B4	5	5	0
chr4:1799254\|1799812	FAM120A	12	4	1
chr4:1799254\|1799812	TBRG4	1	2	0
chr4:1799254\|1799812	PRPF8	0	14	0
chr4:1799254\|1799812	RPS5	0	8	0
chr4:1799254\|1799812	ZNF622	0	3	0
chr4:1799254\|1799812	TAF15	2	4	0
chr4:1799254\|1799812	DHX30	0	2	0
chr4:1799254\|1799812	NUDT21	0	2	0
chr4:1799254\|1799812	GEMIN5	0	3	0
chr4:1799254\|1799812	RBM15B	0	5	0
chr4:1799254\|1799812	XRCC6	0	2	0
chr4:1799254\|1799812	DGCR8	2	4	0
chr4:1799254\|1799812	DROSHA	4	4	0
chr4:1799254\|1799812	SRSF1	0	0	4
chr4:1799254\|1799812	NOP58	1	0	0
chr4:1799254\|1799812	NONO	0	7	0
chr4:1799254\|1799812	NOP56	1	1	0
chr4:1799254\|1799812	SRSF9	0	2	2
chr4:1799254\|1799812	HNRNPU	2	12	0
chr4:1799254\|1799812	DDX54	0	0	1
chr4:1799254\|1799812	LSM11	1	1	0
chr4:1799254\|1799812	EFTUD2	8	12	0
chr4:1799254\|1799812	SMNDC1	0	7	0
chr4:1799254\|1799812	GRWD1	0	8	0
chr4:1799254\|1799812	RBM10	5	2	0
chr4:1799254\|1799812	PCBP2	6	3	0
chr4:1799254\|1799812	HNRNPA2B1	0	0	1
chr4:1799254\|1799812	HNRNPM	0	3	0
chr4:1799254\|1799812	SF3A3	2	1	0
chr4:1799254\|1799812	SSB	0	2	0
chr4:1799254\|1799812	FIP1L1	1	0	0
chr4:1799254\|1799812	MBNL2	0	2	0
chr4:1799254\|1799812	HNRNPC	1	0	0
chr4:1799254\|1799812	TRA2A	0	0	1
chr4:1799254\|1799812	SAFB2	0	2	0
chr4:1799254\|1799812	METAP2	0	1	0
chr4:1799254\|1799812	DDX3X	1	7	1
chr4:1799254\|1799812	RBM15	0	2	0
chr4:1799254\|1799812	LARP7	0	1	0
chr4:1799254\|1799812	ZRANB2	0	2	0
chr4:1799254\|1799812	SF3B1	0	1	0
chr4:1799254\|1799812	HNRNPA1	0	1	0
chr4:1799254\|1799812	LIN28B	0	0	1
chr4:1799254\|1799812	NOL12	0	3	0
chr4:1799254\|1799812	FXR1	1	0	2
chr4:1799254\|1799812	DIS3L2	0	1	0
chr4:1799254\|1799812	UCHL5	0	6	0
chr4:1799254\|1799812	FASTKD2	3	2	0
chr4:1799254\|1799812	MTPAP	0	3	0
chr4:1799254\|1799812	HNRNPUL1	1	0	0
chr4:1799254\|1799812	TARDBP	0	2	0
chr4:1799254\|1799812	YTHDC1	1	0	0
chr4:1799254\|1799812	AIFM1	0	1	0
chr4:1799254\|1799812	BUD13	1	15	1
chr4:1799254\|1799812	RBFOX2	0	17	0
chr4:1799254\|1799812	NKRF	1	9	0
chr4:1799254\|1799812	SERBP1	0	1	0
chr4:1799254\|1799812	DDX42	0	1	0
chr4:1799254\|1799812	CSTF2T	7	2	1
chr4:1799254\|1799812	EWSR1	7	9	0
chr4:1799254\|1799812	SLTM	0	1	0
chr4:1799254\|1799812	DDX6	2	1	0
chr4:1799254\|1799812	RBM22	0	2	0
chr4:1799254\|1799812	XRN2	2	4	0
chr4:1799254\|1799812	SUPV3L1	2	1	0
chr4:1799254\|1799812	PPIG	0	14	1
chr4:1799254\|1799812	DDX24	0	8	0
chr4:1799254\|1799812	FBL	1	2	2
chr4:1799254\|1799812	ATXN2	0	1	0
chr4:1799254\|1799812	CDC40	1	1	0
chr4:1799254\|1799812	EIF4A3	3	8	6
chr4:1799254\|1799812	AGO2	0	0	1

CircRNA Information