CircNet

General Information

circRNA Basic Information

CircID	chr4:184657085\|184682336
Strand	+
CircType	exon
Host Gene	ENSG00000164306.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	TAATTGATAGAAATATTACGTGGGATAGGATTTATTCTCTCCACACTTCTGAACCAATGAATAGAAAATGGGAAGCAAAACTGAAGCAAATTGAAGAACGAGCATCTCATTATGAGAGGAAACCGTTGTCCTCAGTGTATAGACCAAGATTGTCCAAGCCAGAAGAACCACCCTCCATCTGGAGACTATTTCATCGACAAGCTCAAGCTTTTAATTTTGTTAAAAGCTGTAAAGAAGACGTTCATGTATTTGCTTTGGAATGCAAAGTAGGAGATGGACAACGTATTTACCTTGTGACAACCTATGCTGAATTTTGGTTTTACTATAAATCCAGGTTCTCAGATACTTTACGAATTCTTACATGTGAGCCATCTCAGAATAAACAAAAAGGAGTTGGATATTTTAACAGTATCGGCACTTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:184657085\|184682336	hsa-miR-203a-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:184657085\|184682336
ORF Type	ORF1
Protein Length	122
Nucleotide Length	366
Protein Sequence	MNRKWEAKLKQIEERASHYERKPLSSVYRPRLSKPEEPPSIWRLFHRQAQAFNFVKSCKEDVHVFALECKVGDGQRIYLVTTYAEFWFYYKSRFSDTLRILTCEPSQNKQKGVGYFNSIGTS
Nucleotide Sequence	ATGAATAGAAAATGGGAAGCAAAACTGAAGCAAATTGAAGAACGAGCATCTCATTATGAGAGGAAACCGTTGTCCTCAGTGTATAGACCAAGATTGTCCAAGCCAGAAGAACCACCCTCCATCTGGAGACTATTTCATCGACAAGCTCAAGCTTTTAATTTTGTTAAAAGCTGTAAAGAAGACGTTCATGTATTTGCTTTGGAATGCAAAGTAGGAGATGGACAACGTATTTACCTTGTGACAACCTATGCTGAATTTTGGTTTTACTATAAATCCAGGTTCTCAGATACTTTACGAATTCTTACATGTGAGCCATCTCAGAATAAACAAAAAGGAGTTGGATATTTTAACAGTATCGGCACTTCA

CircID	chr4:184657085\|184682336
ORF Type	ORF2
Protein Length	53
Nucleotide Length	159
Protein Sequence	MRGNRCPQCIDQDCPSQKNHPPSGDYFIDKLKLLILLKAVKKTFMYLLWNAK*
Nucleotide Sequence	ATGAGAGGAAACCGTTGTCCTCAGTGTATAGACCAAGATTGTCCAAGCCAGAAGAACCACCCTCCATCTGGAGACTATTTCATCGACAAGCTCAAGCTTTTAATTTTGTTAAAAGCTGTAAAGAAGACGTTCATGTATTTGCTTTGGAATGCAAAGTAG

CircID	chr4:184657085\|184682336
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MLNFGFTINPGSQILYEFLHVSHLRINKKELDILTVSALQ
Nucleotide Sequence	ATGCTGAATTTTGGTTTTACTATAAATCCAGGTTCTCAGATACTTTACGAATTCTTACATGTGAGCCATCTCAGAATAAACAAAAAGGAGTTGGATATTTTAACAGTATCGGCACTTCAG

CircID	chr4:184657085\|184682336
ORF Type	ORF4
Protein Length	36
Nucleotide Length	108
Protein Sequence	MRCSFFNLLQFCFPFSIHWFRSVERINPIPRNISIN
Nucleotide Sequence	ATGAGATGCTCGTTCTTCAATTTGCTTCAGTTTTGCTTCCCATTTTCTATTCATTGGTTCAGAAGTGTGGAGAGAATAAATCCTATCCCACGTAATATTTCTATCAAT

CircID	chr4:184657085\|184682336
ORF Type	ORF5
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLVLQFASVLLPIFYSLVQKCGENKSYPT*
Nucleotide Sequence	ATGCTCGTTCTTCAATTTGCTTCAGTTTTGCTTCCCATTTTCTATTCATTGGTTCAGAAGTGTGGAGAGAATAAATCCTATCCCACGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:184657085\|184682336	GNL3	1	0	0
chr4:184657085\|184682336	U2AF2	2	4	0
chr4:184657085\|184682336	BUD13	0	0	1
chr4:184657085\|184682336	ELAVL1	0	0	1
chr4:184657085\|184682336	ADAR	0	1	0
chr4:184657085\|184682336	HNRNPC	0	5	0
chr4:184657085\|184682336	NOP58	3	0	2
chr4:184657085\|184682336	NOP56	1	0	0
chr4:184657085\|184682336	DDX54	0	0	3
chr4:184657085\|184682336	LSM11	0	1	0
chr4:184657085\|184682336	FUS	0	1	0
chr4:184657085\|184682336	PRPF8	0	1	0
chr4:184657085\|184682336	UPF1	1	0	0
chr4:184657085\|184682336	AGO2	0	1	0
chr4:184657085\|184682336	SRSF1	0	0	1
chr4:184657085\|184682336	IGF2BP2	0	5	6
chr4:184657085\|184682336	TRA2A	0	0	1
chr4:184657085\|184682336	EIF4A3	2	0	4
chr4:184657085\|184682336	FBL	0	1	1

CircRNA Information