CircRNA Information

General Information
circRNA Basic Information
CircID chr4:185614831|185615092
Strand -
CircType exon
Host Gene ENSG00000154556.16;
Algorism CIRI2;
Sequence CTTTCTCAGTGACAGCTCCACATTTGTGTCTGCGTTGAAGTTGTATTTGGCTATAGCTTCTCCGATTTCTCCGGGCTGGGCTGGCGGAGGTGGTCTTGCAGGCTGTGCTTTCTCAGGAGGTGTGAGTTTCTATGAAGGAAATAGTCATTTATTCTCAAATCTGCGGTGACCTTTGAAACCACCGCCATCCAAGAGAGAAAGGGAGAGGACCTACCTCTACGTATGAGATCGGGAAGATGCCCACTCTCCCGTGGTGTTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:185614831|185615092 hsa-let-7b-5p 0 0 1
chr4:185614831|185615092 hsa-let-7b-3p 0 0 1
chr4:185614831|185615092 hsa-let-7c-5p 0 0 1
chr4:185614831|185615092 hsa-let-7c-3p 0 0 1
chr4:185614831|185615092 hsa-let-7d-5p 0 0 1
chr4:185614831|185615092 hsa-let-7d-3p 0 0 1
chr4:185614831|185615092 hsa-let-7e-5p 0 0 1
chr4:185614831|185615092 hsa-let-7e-3p 0 0 1
chr4:185614831|185615092 hsa-miR-95-5p 0 0 1
chr4:185614831|185615092 hsa-miR-95-3p 0 0 1
chr4:185614831|185615092 hsa-miR-98-5p 0 0 1
chr4:185614831|185615092 hsa-miR-98-3p 0 0 1
chr4:185614831|185615092 hsa-miR-204-5p 0 0 1
chr4:185614831|185615092 hsa-miR-204-3p 0 0 1
chr4:185614831|185615092 hsa-miR-205-5p 0 0 1
chr4:185614831|185615092 hsa-miR-205-3p 0 0 1
chr4:185614831|185615092 hsa-miR-211-5p 0 0 1
chr4:185614831|185615092 hsa-miR-211-3p 0 0 1
chr4:185614831|185615092 hsa-let-7g-5p 0 0 1
chr4:185614831|185615092 hsa-let-7g-3p 0 0 1
chr4:185614831|185615092 hsa-let-7i-5p 0 0 1
chr4:185614831|185615092 hsa-let-7i-3p 0 0 1
chr4:185614831|185615092 hsa-miR-376b-5p 0 0 1
chr4:185614831|185615092 hsa-miR-376b-3p 0 0 1
chr4:185614831|185615092 hsa-miR-432-5p 0 0 1
chr4:185614831|185615092 hsa-miR-432-3p 0 0 1
chr4:185614831|185615092 hsa-miR-539-5p 0 0 1
chr4:185614831|185615092 hsa-miR-539-3p 0 0 1
chr4:185614831|185615092 hsa-miR-580-5p 0 0 1
chr4:185614831|185615092 hsa-miR-580-3p 0 0 1
chr4:185614831|185615092 hsa-miR-596 0 1 1
chr4:185614831|185615092 hsa-miR-607 0 0 1
chr4:185614831|185615092 hsa-miR-668-5p 0 0 1
chr4:185614831|185615092 hsa-miR-668-3p 0 0 1
chr4:185614831|185615092 hsa-miR-1228-5p 0 0 1
chr4:185614831|185615092 hsa-miR-1228-3p 0 0 1
chr4:185614831|185615092 hsa-miR-1200 0 0 1
chr4:185614831|185615092 hsa-miR-1277-5p 0 0 1
chr4:185614831|185615092 hsa-miR-1277-3p 0 0 1
chr4:185614831|185615092 hsa-miR-876-3p 0 1 1
chr4:185614831|185615092 hsa-miR-342-3p 0 1 1
chr4:185614831|185615092 hsa-let-7a 0 0 1
chr4:185614831|185615092 hsa-let-7f 0 0 1
chr4:185614831|185615092 hsa-miR-1300 0 0 1
chr4:185614831|185615092 hsa-miR-376a 0 0 1
chr4:185614831|185615092 hsa-miR-220a 0 0 1
chr4:185614831|185615092 hsa-miR-1470 1 0 0
chr4:185614831|185615092 hsa-miR-4251 0 1 0
chr4:185614831|185615092 hsa-miR-4458 0 1 0
chr4:185614831|185615092 hsa-miR-3974 0 1 0
chr4:185614831|185615092 hsa-miR-4657 0 1 0
chr4:185614831|185615092 hsa-miR-4696 0 1 0
chr4:185614831|185615092 hsa-miR-5192 0 1 0
chr4:185614831|185615092 hsa-miR-5685 0 1 0
chr4:185614831|185615092 hsa-miR-5703 0 1 0
chr4:185614831|185615092 hsa-miR-6084 1 1 0
chr4:185614831|185615092 hsa-miR-6873-3p 0 1 0
chr4:185614831|185615092 hsa-miR-6849-3p 1 1 0
chr4:185614831|185615092 hsa-miR-6832-3p 0 1 0
chr4:185614831|185615092 hsa-miR-6770-5p 1 1 0
chr4:185614831|185615092 hsa-miR-6874-5p 0 1 0
chr4:185614831|185615092 hsa-miR-3194-5p 1 1 0
chr4:185614831|185615092 hsa-miR-4436b-5p 1 0 0
chr4:185614831|185615092 hsa-miR-4763-5p 1 0 0
chr4:185614831|185615092 hsa-miR-7854-3p 1 0 0
chr4:185614831|185615092 hsa-miR-7111-3p 0 1 0
chr4:185614831|185615092 hsa-miR-6878-5p 0 1 0
chr4:185614831|185615092 hsa-miR-526b-5p 0 1 0
chr4:185614831|185615092 hsa-miR-330-3p 0 1 0
chr4:185614831|185615092 hsa-miR-6767-5p 0 1 0
chr4:185614831|185615092 hsa-miR-6750-3p 0 1 0
chr4:185614831|185615092 hsa-miR-6756-5p 1 0 0
chr4:185614831|185615092 hsa-miR-4685-3p 0 1 0
chr4:185614831|185615092 hsa-miR-6731-5p 0 1 0
chr4:185614831|185615092 hsa-miR-10398-3p 0 1 0
chr4:185614831|185615092 hsa-miR-4768-5p 0 1 0
chr4:185614831|185615092 hsa-miR-5006-3p 0 1 0
chr4:185614831|185615092 hsa-miR-4690-3p 0 1 0
chr4:185614831|185615092 hsa-miR-21-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr4:185614831|185615092
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MKLYLAIASPISPGWAGGGGLAGCAFSGGVSFYEGNSHLFSNLR
Nucleotide Sequence TTGAAGTTGTATTTGGCTATAGCTTCTCCGATTTCTCCGGGCTGGGCTGGCGGAGGTGGTCTTGCAGGCTGTGCTTTCTCAGGAGGTGTGAGTTTCTATGAAGGAAATAGTCATTTATTCTCAAATCTGCGGTGA
CircID chr4:185614831|185615092
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MAVVSKVTADLRINDYFLHRNSHLLRKHSLQDHLRQPSPEKSEKL
Nucleotide Sequence ATGGCGGTGGTTTCAAAGGTCACCGCAGATTTGAGAATAAATGACTATTTCCTTCATAGAAACTCACACCTCCTGAGAAAGCACAGCCTGCAAGACCACCTCCGCCAGCCCAGCCCGGAGAAATCGGAGAAGCTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab