CircNet

General Information

circRNA Basic Information

CircID	chr4:185645043\|185645226
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	AAAATTTTAATGATCTTTCTAGTAATTTATGAGACTCTTAGGATAACGAACATGGTAATGGTATTGGAATGCTTTGGTAGCCGTGGTGTCAGGAAACAGGATTGGTTTTAGACGCTCTCCCACCACGATGTTTCTATTATTTAGTCATTCAGTAAAACTGACTGAGCACCAGCTACATGCCAGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:185645043\|185645226	hsa-miR-223-5p	0	0	1
chr4:185645043\|185645226	hsa-miR-223-3p	0	0	1
chr4:185645043\|185645226	hsa-miR-494-5p	0	0	1
chr4:185645043\|185645226	hsa-miR-494-3p	0	0	1
chr4:185645043\|185645226	hsa-miR-541-5p	0	0	1
chr4:185645043\|185645226	hsa-miR-541-3p	0	0	1
chr4:185645043\|185645226	hsa-miR-1179	0	0	1
chr4:185645043\|185645226	hsa-miR-1200	0	0	1
chr4:185645043\|185645226	hsa-miR-28-3p	0	0	1
chr4:185645043\|185645226	hsa-miR-654-5p	0	0	1
chr4:185645043\|185645226	hsa-miR-330-3p	0	0	1
chr4:185645043\|185645226	hsa-miR-885-5p	0	0	1
chr4:185645043\|185645226	hsa-miR-138	0	0	1
chr4:185645043\|185645226	hsa-miR-3689c	1	0	0
chr4:185645043\|185645226	hsa-miR-4651	1	0	0
chr4:185645043\|185645226	hsa-miR-138-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-3677-3p	1	0	0
chr4:185645043\|185645226	hsa-miR-378a-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-6730-3p	0	1	0
chr4:185645043\|185645226	hsa-miR-1910-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-4774-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-624-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-1233-5p	1	0	0
chr4:185645043\|185645226	hsa-miR-3689b-3p	1	0	0
chr4:185645043\|185645226	hsa-miR-3689a-3p	1	0	0
chr4:185645043\|185645226	hsa-miR-30c-1-3p	0	1	0
chr4:185645043\|185645226	hsa-miR-6731-5p	1	0	0
chr4:185645043\|185645226	hsa-miR-6785-5p	1	0	0
chr4:185645043\|185645226	hsa-miR-3136-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-5588-5p	0	1	0
chr4:185645043\|185645226	hsa-miR-4720-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:185645043\|185645226
ORF Type	ORF1
Protein Length	33
Nucleotide Length	102
Protein Sequence	MIFLVIYETLRITNMVMVLECFGSRGVRKQDWF
Nucleotide Sequence	ATGATCTTTCTAGTAATTTATGAGACTCTTAGGATAACGAACATGGTAATGGTATTGGAATGCTTTGGTAGCCGTGGTGTCAGGAAACAGGATTGGTTTTAG

CircID	chr4:185645043\|185645226
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MVAVVSGNRIGFRRSPTTMFLLFSHSVKLTEHQLHAR
Nucleotide Sequence	TTGGTAGCCGTGGTGTCAGGAAACAGGATTGGTTTTAGACGCTCTCCCACCACGATGTTTCTATTATTTAGTCATTCAGTAAAACTGACTGAGCACCAGCTACATGCCAGG

CircID	chr4:185645043\|185645226
ORF Type	ORF3
Protein Length	26
Nucleotide Length	81
Protein Sequence	MFPDTTATKAFQYHYHVRYPKSLINY
Nucleotide Sequence	CTGTTTCCTGACACCACGGCTACCAAAGCATTCCAATACCATTACCATGTTCGTTATCCTAAGAGTCTCATAAATTACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information