CircNet

General Information

circRNA Basic Information

CircID	chr4:2128113\|2229243
Strand	-
CircType	exon
Host Gene	ENSG00000130997.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GATTTTGTGAAAATGGAAAATTATGAGGCATTGGTAGGCTTTGATCTCTGTAATACACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGCTATGCATTCAGGTGATTTAGTGGATTCTAAGACTTGGGGAAAGAGTACAGAGACTATGGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAAGACTCAATCACCAGAAAAAAAGGTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGACTTTTCACAGATTGAATTGCGCATTCTTACACATTTATCTGGAGATCCGGAACTTCTGAAGTTATTCCAGGAATCTGAAAGAGATGATGTATTTTCTACTCTGACTTCACAGTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:2128113\|2229243
ORF Type	ORF1
Protein Length	95
Nucleotide Length	285
Protein Sequence	MENYEALVGFDLCNTPLSSVAQKIMSAMHSGDLVDSKTWGKSTETMEVINKSSVKYSVQLEDRKTQSPEKKVKKTRFSRSPRGPCLFHPKATPF*
Nucleotide Sequence	ATGGAAAATTATGAGGCATTGGTAGGCTTTGATCTCTGTAATACACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGCTATGCATTCAGGTGATTTAGTGGATTCTAAGACTTGGGGAAAGAGTACAGAGACTATGGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAAGACTCAATCACCAGAAAAAAAGGTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAG

CircID	chr4:2128113\|2229243
ORF Type	ORF2
Protein Length	52
Nucleotide Length	156
Protein Sequence	MRNSICEKSAARKVWPLDETNMALGEIVRILSSLPFFLVIESSCLQVVLNT*
Nucleotide Sequence	ATGCGCAATTCAATCTGTGAAAAGTCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGATCGTGAGAATCTTGTCTTCTTTACCTTTTTTTCTGGTGATTGAGTCTTCCTGTCTTCAAGTTGTACTGAATACTTAA

CircID	chr4:2128113\|2229243
ORF Type	ORF3
Protein Length	51
Nucleotide Length	153
Protein Sequence	MFVSSKGHTFLAADFSQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQ
Nucleotide Sequence	ATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGACTTTTCACAGATTGAATTGCGCATTCTTACACATTTATCTGGAGATCCGGAACTTCTGAAGTTATTCCAGGAATCTGAAAGAGATGATGTATTTTCTACTCTGACTTCACAG

CircID	chr4:2128113\|2229243
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MHSRHNLLSNTGERCITEIKAYQCLIIFHFHKI
Nucleotide Sequence	ATGCATAGCAGACATAATCTTCTGAGCAACACTGGAGAGCGGTGTATTACAGAGATCAAAGCCTACCAATGCCTCATAATTTTCCATTTTCACAAAATC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:2128113\|2229243	MOV10	26	0	1
chr4:2128113\|2229243	ELAVL1	22	0	0
chr4:2128113\|2229243	FAM120A	1	0	0
chr4:2128113\|2229243	PUM2	1	0	0
chr4:2128113\|2229243	CPSF7	6	0	0
chr4:2128113\|2229243	YTHDF1	3	0	0
chr4:2128113\|2229243	UPF1	1	0	0
chr4:2128113\|2229243	CAPRIN1	1	0	0
chr4:2128113\|2229243	FMR1	12	0	0
chr4:2128113\|2229243	CPSF6	2	0	0
chr4:2128113\|2229243	NUDT21	3	0	0
chr4:2128113\|2229243	CSTF2	10	0	0
chr4:2128113\|2229243	RBM15B	3	0	0
chr4:2128113\|2229243	FUS	0	1	1
chr4:2128113\|2229243	WDR33	3	0	0
chr4:2128113\|2229243	SRSF1	6	0	0
chr4:2128113\|2229243	NOP58	2	1	3
chr4:2128113\|2229243	ADAR	9	0	0
chr4:2128113\|2229243	U2AF2	33	0	0
chr4:2128113\|2229243	DDX54	0	0	1
chr4:2128113\|2229243	FIP1L1	5	0	0
chr4:2128113\|2229243	PTBP1	1	0	0
chr4:2128113\|2229243	HNRNPC	43	0	0
chr4:2128113\|2229243	DHX9	2	0	1
chr4:2128113\|2229243	DDX3X	3	0	0
chr4:2128113\|2229243	ZC3H7B	2	0	1
chr4:2128113\|2229243	YTHDC1	16	0	0
chr4:2128113\|2229243	HNRNPA1	14	0	0
chr4:2128113\|2229243	LIN28B	2	0	0
chr4:2128113\|2229243	FXR1	1	0	0
chr4:2128113\|2229243	FXR2	2	0	0
chr4:2128113\|2229243	DGCR8	0	1	0
chr4:2128113\|2229243	SND1	1	0	0
chr4:2128113\|2229243	IGF2BP1	1	0	0
chr4:2128113\|2229243	IGF2BP3	8	0	1
chr4:2128113\|2229243	IGF2BP2	4	0	1
chr4:2128113\|2229243	TARDBP	5	1	0
chr4:2128113\|2229243	STAU1	2	0	0
chr4:2128113\|2229243	RBFOX2	0	2	0
chr4:2128113\|2229243	YTHDF2	3	0	0
chr4:2128113\|2229243	CSTF2T	8	0	0
chr4:2128113\|2229243	TIA1	1	0	0
chr4:2128113\|2229243	AGO3	1	0	0
chr4:2128113\|2229243	TIAL1	1	0	0
chr4:2128113\|2229243	AGO2	2	0	0
chr4:2128113\|2229243	ATXN2	4	0	0
chr4:2128113\|2229243	EWSR1	2	0	0
chr4:2128113\|2229243	EIF4A3	1	2	5
chr4:2128113\|2229243	FBL	1	0	1

CircRNA Information