CircNet

General Information

circRNA Basic Information

CircID	chr4:26717933\|26748526
Strand	+
CircType	exon
Host Gene	ENSG00000109680.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTATTACTTTGTTTTTCCCGGGATACATCTGTGTTGAGTCACTTTGCATTCAACAGTGCCTCGCCACCAAAATCATACATAAGAGGAAAACTAGGACTGGAAGAATATGCTGTCTTTTACCCACCAAATGATAAAGAAACTGAGGCATAGAGTGTTAACCTGCCCAACAGGTGTTATCCCTTTTCATGGATTTTCAATGTATGTTGCACCACTTTGTTTTCTATACCATGAACCTTCCAAATTGTATCAGATATTCCGTGAGATGTATGTGCGTTTTTTCTTCAGACTCCATTCCATCTCTTCTCATCCTTCTGGTATTGTGTCACTCTGTCTGCTGTTTGAAACTCTTCTTCAAACTTATCTTCCCCAACTCTTTTATCATCTACGAGAAATTGGGGCTCAACCACTTCGCATATCATTTAAGTGGATGGTTCGAGCTTTCTCTGGATACTTAGCTACAGATCAGCTCTTGCTTTTATGGGATAGAATCCTAGGATACAACTCTCTGGAAATTCTTGCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:26717933\|26748526
ORF Type	ORF1
Protein Length	138
Nucleotide Length	414
Protein Sequence	MLSFTHQMIKKLRHRVLTCPTGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILA
Nucleotide Sequence	ATGCTGTCTTTTACCCACCAAATGATAAAGAAACTGAGGCATAGAGTGTTAACCTGCCCAACAGGTGTTATCCCTTTTCATGGATTTTCAATGTATGTTGCACCACTTTGTTTTCTATACCATGAACCTTCCAAATTGTATCAGATATTCCGTGAGATGTATGTGCGTTTTTTCTTCAGACTCCATTCCATCTCTTCTCATCCTTCTGGTATTGTGTCACTCTGTCTGCTGTTTGAAACTCTTCTTCAAACTTATCTTCCCCAACTCTTTTATCATCTACGAGAAATTGGGGCTCAACCACTTCGCATATCATTTAAGTGGATGGTTCGAGCTTTCTCTGGATACTTAGCTACAGATCAGCTCTTGCTTTTATGGGATAGAATCCTAGGATACAACTCTCTGGAAATTCTTGCT

CircID	chr4:26717933\|26748526
ORF Type	ORF2
Protein Length	90
Nucleotide Length	270
Protein Sequence	MDFQCMLHHFVFYTMNLPNCIRYSVRCMCVFSSDSIPSLLILLVLCHSVCCLKLFFKLIFPNSFIIYEKLGLNHFAYHLSGWFELSLDT*
Nucleotide Sequence	ATGGATTTTCAATGTATGTTGCACCACTTTGTTTTCTATACCATGAACCTTCCAAATTGTATCAGATATTCCGTGAGATGTATGTGCGTTTTTTCTTCAGACTCCATTCCATCTCTTCTCATCCTTCTGGTATTGTGTCACTCTGTCTGCTGTTTGAAACTCTTCTTCAAACTTATCTTCCCCAACTCTTTTATCATCTACGAGAAATTGGGGCTCAACCACTTCGCATATCATTTAAGTGGATGGTTCGAGCTTTCTCTGGATACTTAG

CircID	chr4:26717933\|26748526
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MICEVVEPQFLVDDKRVGEDKFEEEFQTADRVTQYQKDEKRWNGV*
Nucleotide Sequence	ATGATATGCGAAGTGGTTGAGCCCCAATTTCTCGTAGATGATAAAAGAGTTGGGGAAGATAAGTTTGAAGAAGAGTTTCAAACAGCAGACAGAGTGACACAATACCAGAAGGATGAGAAGAGATGGAATGGAGTCTGA

CircID	chr4:26717933\|26748526
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MPQFLYHLVGKRQHILPVLVFLLCMILVARHC*
Nucleotide Sequence	ATGCCTCAGTTTCTTTATCATTTGGTGGGTAAAAGACAGCATATTCTTCCAGTCCTAGTTTTCCTCTTATGTATGATTTTGGTGGCGAGGCACTGTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:26717933\|26748526	RBM5	1	0	0
chr4:26717933\|26748526	ELAVL1	0	1	1
chr4:26717933\|26748526	PRPF8	0	1	0
chr4:26717933\|26748526	TAF15	1	0	0
chr4:26717933\|26748526	NUDT21	1	0	0
chr4:26717933\|26748526	FUS	3	2	0
chr4:26717933\|26748526	SRSF1	0	0	1
chr4:26717933\|26748526	NOP58	0	0	2
chr4:26717933\|26748526	U2AF2	3	2	3
chr4:26717933\|26748526	RBM10	1	0	0
chr4:26717933\|26748526	HNRNPL	1	0	0
chr4:26717933\|26748526	PCBP2	0	1	0
chr4:26717933\|26748526	PTBP1	9	0	0
chr4:26717933\|26748526	HNRNPC	0	4	4
chr4:26717933\|26748526	HNRNPD	1	0	0
chr4:26717933\|26748526	LIN28B	0	1	0
chr4:26717933\|26748526	IGF2BP1	0	0	1
chr4:26717933\|26748526	IGF2BP3	0	0	2
chr4:26717933\|26748526	IGF2BP2	0	0	2
chr4:26717933\|26748526	YTHDC1	0	0	1
chr4:26717933\|26748526	RBFOX2	0	1	0
chr4:26717933\|26748526	WDR33	1	0	0
chr4:26717933\|26748526	EIF4A3	0	0	3
chr4:26717933\|26748526	FBL	0	0	1

CircRNA Information