CircNet

General Information

circRNA Basic Information

CircID	chr4:26919504\|26957726
Strand	+
CircType	exon
Host Gene	ENSG00000109689.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATCCCTGCATGTCACTGAGTCCACCATGCTTTACAGAAGAAGACAGATTTAGTCTGGAAGCTCTTCAAACAATACATAAACAAATGGATGATGACAAAGATGGTGGAATTGAAGTAGAGGAAAGTGATGAATTCATCAGAGAAGATATGAAATATAAAGATGCTACTAATAAACACAGCCATCTGCACAGAGAAGATAAACATATAACGATTGAGGATTTATGGAAACGATGGAAAACATCAGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:26919504\|26957726	hsa-miR-138-1-3p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:26919504\|26957726
ORF Type	ORF1
Protein Length	79
Nucleotide Length	237
Protein Sequence	MSLSPPCFTEEDRFSLEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHSHLHREDKHITIEDLWKRWKTSE
Nucleotide Sequence	ATGTCACTGAGTCCACCATGCTTTACAGAAGAAGACAGATTTAGTCTGGAAGCTCTTCAAACAATACATAAACAAATGGATGATGACAAAGATGGTGGAATTGAAGTAGAGGAAAGTGATGAATTCATCAGAGAAGATATGAAATATAAAGATGCTACTAATAAACACAGCCATCTGCACAGAGAAGATAAACATATAACGATTGAGGATTTATGGAAACGATGGAAAACATCAGAA

CircID	chr4:26919504\|26957726
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MFIFSVQMAVFISSIFIFHIFSDEFITFLYFNSTIFVIIHLFMYCLKSFQTKSVFFCKAWWTQ*
Nucleotide Sequence	ATGTTTATCTTCTCTGTGCAGATGGCTGTGTTTATTAGTAGCATCTTTATATTTCATATCTTCTCTGATGAATTCATCACTTTCCTCTACTTCAATTCCACCATCTTTGTCATCATCCATTTGTTTATGTATTGTTTGAAGAGCTTCCAGACTAAATCTGTCTTCTTCTGTAAAGCATGGTGGACTCAGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:26919504\|26957726	FUS	2	1	0
chr4:26919504\|26957726	TAF15	1	1	0
chr4:26919504\|26957726	NUDT21	0	0	1
chr4:26919504\|26957726	ELAVL1	3	2	0
chr4:26919504\|26957726	DGCR8	0	0	1
chr4:26919504\|26957726	SRSF1	0	0	1
chr4:26919504\|26957726	NOP58	1	0	4
chr4:26919504\|26957726	U2AF2	0	1	0
chr4:26919504\|26957726	SRSF9	1	0	0
chr4:26919504\|26957726	DDX54	1	0	7
chr4:26919504\|26957726	HNRNPL	0	1	0
chr4:26919504\|26957726	FIP1L1	1	0	0
chr4:26919504\|26957726	PTBP1	6	5	0
chr4:26919504\|26957726	TRA2A	0	1	3
chr4:26919504\|26957726	SMNDC1	1	0	0
chr4:26919504\|26957726	MSI2	0	0	1
chr4:26919504\|26957726	HNRNPA1	1	0	0
chr4:26919504\|26957726	IGF2BP1	0	0	1
chr4:26919504\|26957726	IGF2BP3	0	0	1
chr4:26919504\|26957726	IGF2BP2	0	3	5
chr4:26919504\|26957726	TARDBP	0	2	0
chr4:26919504\|26957726	BUD13	0	1	0
chr4:26919504\|26957726	CSTF2T	1	0	1
chr4:26919504\|26957726	TIA1	0	1	0
chr4:26919504\|26957726	DKC1	1	0	0
chr4:26919504\|26957726	FBL	0	1	3
chr4:26919504\|26957726	EIF4A3	0	0	4
chr4:26919504\|26957726	AGO2	0	0	1

CircRNA Information