CircNet

General Information

circRNA Basic Information

CircID	chr4:3129924\|3189093
Strand	+
CircType	exon
Host Gene	ENSG00000197386.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGTTAGACGGTACCGACAACCAGTATTTGGGCCTGCAGATTGGACAGCCCCAGGATGAAGATGAGGAAGCCACAGGTATTCTTCCTGATGAAGCCTCGGAGGCCTTCAGGAACTCTTCCATGGCCCTTCAACAGGCACATTTATTGAAAAACATGAGTCACTGCAGGCAGCCTTCTGACAGCAGTGTTGATAAATTTGTGTTGAGAGATGAAGCTACTGAACCGGGTGATCAAGAAAACAAGCCTTGCCGCATCAAAGGTGACATTGGACAGTCCACTGATGATGACTCTGCACCTCTTGTCCATTGTGTCCGCCTTTTATCTGCTTCGTTTTTGCTAACAGGGGGAAAAAATGGTTTCTATTACAACTGGTTGGTATTCTTTTAGAAGACATTGTTACAAAACAGCTGAAGGTGGAAATGAGTGAGCAGCAACATACTTTCTATTGCCAGGAACTAGGCACACTGCTAATGTGTCTGATCCACATCTTCAAGTCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:3129924\|3189093	hsa-miR-17-3p	0	1	1
chr4:3129924\|3189093	hsa-miR-95-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:3129924\|3189093
ORF Type	ORF1
Protein Length	89
Nucleotide Length	267
Protein Sequence	MALQQAHLLKNMSHCRQPSDSSVDKFVLRDEATEPGDQENKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNGFYYNWLVFF*
Nucleotide Sequence	ATGGCCCTTCAACAGGCACATTTATTGAAAAACATGAGTCACTGCAGGCAGCCTTCTGACAGCAGTGTTGATAAATTTGTGTTGAGAGATGAAGCTACTGAACCGGGTGATCAAGAAAACAAGCCTTGCCGCATCAAAGGTGACATTGGACAGTCCACTGATGATGACTCTGCACCTCTTGTCCATTGTGTCCGCCTTTTATCTGCTTCGTTTTTGCTAACAGGGGGAAAAAATGGTTTCTATTACAACTGGTTGGTATTCTTTTAG

CircID	chr4:3129924\|3189093
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MDKRCRVIISGLSNVTFDAARLVFLITRFSSFISQHKFINTAVRRLPAVTHVFQ*
Nucleotide Sequence	ATGGACAAGAGGTGCAGAGTCATCATCAGTGGACTGTCCAATGTCACCTTTGATGCGGCAAGGCTTGTTTTCTTGATCACCCGGTTCAGTAGCTTCATCTCTCAACACAAATTTATCAACACTGCTGTCAGAAGGCTGCCTGCAGTGACTCATGTTTTTCAATAA

CircID	chr4:3129924\|3189093
ORF Type	ORF3
Protein Length	47
Nucleotide Length	141
Protein Sequence	MSSKRIPTSCNRNHFFPLLAKTKQIKGGHNGQEVQSHHQWTVQCHL*
Nucleotide Sequence	ATGTCTTCTAAAAGAATACCAACCAGTTGTAATAGAAACCATTTTTTCCCCCTGTTAGCAAAAACGAAGCAGATAAAAGGCGGACACAATGGACAAGAGGTGCAGAGTCATCATCAGTGGACTGTCCAATGTCACCTTTGA

CircID	chr4:3129924\|3189093
ORF Type	ORF4
Protein Length	46
Nucleotide Length	138
Protein Sequence	MCLLKGHGRVPEGLRGFIRKNTCGFLIFILGLSNLQAQILVVGTV*
Nucleotide Sequence	ATGTGCCTGTTGAAGGGCCATGGAAGAGTTCCTGAAGGCCTCCGAGGCTTCATCAGGAAGAATACCTGTGGCTTCCTCATCTTCATCCTGGGGCTGTCCAATCTGCAGGCCCAAATACTGGTTGTCGGTACCGTCTAA

CircID	chr4:3129924\|3189093
ORF Type	ORF5
Protein Length	44
Nucleotide Length	132
Protein Sequence	MKLLNRVIKKTSLAASKVTLDSPLMMTLHLLSIVSAFYLLRFC*
Nucleotide Sequence	ATGAAGCTACTGAACCGGGTGATCAAGAAAACAAGCCTTGCCGCATCAAAGGTGACATTGGACAGTCCACTGATGATGACTCTGCACCTCTTGTCCATTGTGTCCGCCTTTTATCTGCTTCGTTTTTGCTAA

CircID	chr4:3129924\|3189093
ORF Type	ORF6
Protein Length	40
Nucleotide Length	120
Protein Sequence	MEEFLKASEASSGRIPVASSSSSWGCPICRPKYWLSVPSN
Nucleotide Sequence	ATGGAAGAGTTCCTGAAGGCCTCCGAGGCTTCATCAGGAAGAATACCTGTGGCTTCCTCATCTTCATCCTGGGGCTGTCCAATCTGCAGGCCCAAATACTGGTTGTCGGTACCGTCTAAC

CircID	chr4:3129924\|3189093
ORF Type	ORF7
Protein Length	31
Nucleotide Length	93
Protein Sequence	MKMRKPQVFFLMKPRRPSGTLPWPFNRHIY*
Nucleotide Sequence	ATGAAGATGAGGAAGCCACAGGTATTCTTCCTGATGAAGCCTCGGAGGCCTTCAGGAACTCTTCCATGGCCCTTCAACAGGCACATTTATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:3129924\|3189093	KHSRP	1	0	0
chr4:3129924\|3189093	MOV10	0	0	1
chr4:3129924\|3189093	ELAVL1	0	1	1
chr4:3129924\|3189093	SF3B4	1	0	0
chr4:3129924\|3189093	FAM120A	0	0	1
chr4:3129924\|3189093	TBRG4	1	0	0
chr4:3129924\|3189093	PRPF8	0	1	0
chr4:3129924\|3189093	UPF1	1	0	0
chr4:3129924\|3189093	FMR1	0	0	6
chr4:3129924\|3189093	CPSF6	0	0	1
chr4:3129924\|3189093	NUDT21	2	0	0
chr4:3129924\|3189093	RBM15B	1	0	0
chr4:3129924\|3189093	TROVE2	1	0	0
chr4:3129924\|3189093	FUS	1	1	0
chr4:3129924\|3189093	EIF3H	2	0	0
chr4:3129924\|3189093	DGCR8	0	0	2
chr4:3129924\|3189093	SRSF7	0	0	2
chr4:3129924\|3189093	SRSF1	0	0	4
chr4:3129924\|3189093	NOP58	0	0	2
chr4:3129924\|3189093	U2AF1	1	0	4
chr4:3129924\|3189093	U2AF2	8	5	8
chr4:3129924\|3189093	SRSF9	0	0	1
chr4:3129924\|3189093	NOP56	0	1	0
chr4:3129924\|3189093	DDX54	1	1	18
chr4:3129924\|3189093	EFTUD2	1	0	0
chr4:3129924\|3189093	GRWD1	1	0	0
chr4:3129924\|3189093	RBM10	4	1	0
chr4:3129924\|3189093	PCBP2	1	0	0
chr4:3129924\|3189093	RBM15	1	0	0
chr4:3129924\|3189093	PTBP1	16	3	2
chr4:3129924\|3189093	HNRNPC	10	12	9
chr4:3129924\|3189093	TRA2A	0	0	4
chr4:3129924\|3189093	DDX3X	2	0	0
chr4:3129924\|3189093	SMNDC1	1	0	1
chr4:3129924\|3189093	MSI2	0	0	1
chr4:3129924\|3189093	LIN28B	0	0	1
chr4:3129924\|3189093	RANGAP1	0	0	1
chr4:3129924\|3189093	FXR1	0	0	6
chr4:3129924\|3189093	FXR2	1	0	4
chr4:3129924\|3189093	IGF2BP1	0	0	4
chr4:3129924\|3189093	FASTKD2	1	0	0
chr4:3129924\|3189093	IGF2BP3	0	0	3
chr4:3129924\|3189093	IGF2BP2	2	0	4
chr4:3129924\|3189093	FTO	1	0	0
chr4:3129924\|3189093	TARDBP	4	1	0
chr4:3129924\|3189093	BUD13	2	0	3
chr4:3129924\|3189093	RBFOX2	2	0	0
chr4:3129924\|3189093	DDX24	2	0	0
chr4:3129924\|3189093	EIF4G2	0	0	1
chr4:3129924\|3189093	DDX42	0	1	0
chr4:3129924\|3189093	CSTF2T	0	1	4
chr4:3129924\|3189093	YWHAG	0	0	1
chr4:3129924\|3189093	RBM27	0	1	0
chr4:3129924\|3189093	RBM22	0	1	0
chr4:3129924\|3189093	ILF3	0	1	0
chr4:3129924\|3189093	PPIG	8	0	0
chr4:3129924\|3189093	AGO2	1	0	1
chr4:3129924\|3189093	EIF4A3	4	1	8
chr4:3129924\|3189093	FBL	0	0	3

CircRNA Information