CircRNA Information

General Information
circRNA Basic Information
CircID chr4:3512835|3513036
Strand -
CircType exon
Host Gene ENSG00000163956.9;
Algorism CIRI2;
Sequence CAGAAACAATCCTTCCTGCCTCGACACCCGTGCCAGCCCCAGCCACCCTGACGGCGGGCTGTCCACGGAAATGCCACGGCCAAGAGCCCAGGTCCTTCACGCTGGCCTCTTCCCTGCCGGGCTGGGCTCCCCAATGCCTTCAGAGTTCGTTGTGCCGAGCTCTGGAGATCCTGCCGGACAGGTCCTGCAGATGCTTCTTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:3512835|3513036 hsa-miR-492 0 1 1
chr4:3512835|3513036 hsa-miR-564 1 1 1
chr4:3512835|3513036 hsa-miR-631 0 0 1
chr4:3512835|3513036 hsa-miR-766-5p 0 0 1
chr4:3512835|3513036 hsa-miR-766-3p 0 0 1
chr4:3512835|3513036 hsa-miR-939-5p 0 0 1
chr4:3512835|3513036 hsa-miR-939-3p 0 0 1
chr4:3512835|3513036 hsa-miR-940 0 0 1
chr4:3512835|3513036 hsa-miR-1205 0 1 1
chr4:3512835|3513036 hsa-miR-1286 0 0 1
chr4:3512835|3513036 hsa-miR-1256 0 0 1
chr4:3512835|3513036 hsa-miR-1252-5p 0 0 1
chr4:3512835|3513036 hsa-miR-1252-3p 0 0 1
chr4:3512835|3513036 hsa-miR-1827 0 1 1
chr4:3512835|3513036 hsa-miR-1184 0 0 1
chr4:3512835|3513036 hsa-miR-525-5p 0 0 1
chr4:3512835|3513036 hsa-miR-1207-5p 1 1 1
chr4:3512835|3513036 hsa-miR-520a-5p 0 0 1
chr4:3512835|3513036 hsa-miR-661 1 0 0
chr4:3512835|3513036 hsa-miR-663a 1 0 0
chr4:3512835|3513036 hsa-miR-762 1 1 0
chr4:3512835|3513036 hsa-miR-3138 0 1 0
chr4:3512835|3513036 hsa-miR-4270 1 0 0
chr4:3512835|3513036 hsa-miR-3661 1 1 0
chr4:3512835|3513036 hsa-miR-4458 1 0 0
chr4:3512835|3513036 hsa-miR-4476 0 1 0
chr4:3512835|3513036 hsa-miR-4498 0 1 0
chr4:3512835|3513036 hsa-miR-4505 1 1 0
chr4:3512835|3513036 hsa-miR-4506 1 0 0
chr4:3512835|3513036 hsa-miR-4669 1 0 0
chr4:3512835|3513036 hsa-miR-4673 1 0 0
chr4:3512835|3513036 hsa-miR-4688 1 0 0
chr4:3512835|3513036 hsa-miR-4706 1 1 0
chr4:3512835|3513036 hsa-miR-4736 1 0 0
chr4:3512835|3513036 hsa-miR-4739 1 1 0
chr4:3512835|3513036 hsa-miR-5787 1 1 0
chr4:3512835|3513036 hsa-miR-6133 1 0 0
chr4:3512835|3513036 hsa-miR-7150 1 0 0
chr4:3512835|3513036 hsa-miR-8072 1 0 0
chr4:3512835|3513036 hsa-miR-8089 1 0 0
chr4:3512835|3513036 hsa-miR-9500 0 1 0
chr4:3512835|3513036 hsa-miR-132-5p 0 1 0
chr4:3512835|3513036 hsa-miR-4731-5p 0 1 0
chr4:3512835|3513036 hsa-miR-7106-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6089 1 1 0
chr4:3512835|3513036 hsa-miR-6727-5p 1 0 0
chr4:3512835|3513036 hsa-miR-3622b-5p 1 0 0
chr4:3512835|3513036 hsa-miR-185-3p 0 1 0
chr4:3512835|3513036 hsa-miR-6782-5p 1 0 0
chr4:3512835|3513036 hsa-miR-1226-5p 1 0 0
chr4:3512835|3513036 hsa-miR-1908-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6771-5p 1 0 0
chr4:3512835|3513036 hsa-let-7b-5p 1 0 0
chr4:3512835|3513036 hsa-miR-149-3p 1 0 0
chr4:3512835|3513036 hsa-miR-6824-5p 1 0 0
chr4:3512835|3513036 hsa-miR-339-5p 0 1 0
chr4:3512835|3513036 hsa-let-7e-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6720-3p 1 0 0
chr4:3512835|3513036 hsa-miR-3180-5p 0 1 0
chr4:3512835|3513036 hsa-miR-1295b-3p 1 0 0
chr4:3512835|3513036 hsa-miR-6816-3p 0 1 0
chr4:3512835|3513036 hsa-miR-4763-3p 1 1 0
chr4:3512835|3513036 hsa-miR-6787-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6775-5p 1 0 0
chr4:3512835|3513036 hsa-miR-1343-5p 1 1 0
chr4:3512835|3513036 hsa-miR-6743-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6752-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6754-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6756-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6803-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6722-3p 1 0 0
chr4:3512835|3513036 hsa-miR-6780a-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6797-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6808-5p 1 1 0
chr4:3512835|3513036 hsa-miR-7111-5p 1 0 0
chr4:3512835|3513036 hsa-miR-5196-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6836-5p 1 0 0
chr4:3512835|3513036 hsa-miR-10396b-5p 1 0 0
chr4:3512835|3513036 hsa-miR-1909-3p 1 0 0
chr4:3512835|3513036 hsa-miR-328-5p 1 0 0
chr4:3512835|3513036 hsa-miR-4632-5p 1 0 0
chr4:3512835|3513036 hsa-miR-4725-3p 1 1 0
chr4:3512835|3513036 hsa-miR-4749-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6735-5p 1 0 0
chr4:3512835|3513036 hsa-miR-6846-5p 1 1 0
chr4:3512835|3513036 hsa-miR-6848-5p 1 0 0
chr4:3512835|3513036 hsa-miR-4436b-3p 1 0 0
chr4:3512835|3513036 hsa-miR-7843-5p 1 0 0
chr4:3512835|3513036 hsa-miR-4646-5p 1 0 0
chr4:3512835|3513036 hsa-miR-9851-5p 0 1 0
chr4:3512835|3513036 hsa-miR-10400-3p 0 1 0
chr4:3512835|3513036 hsa-miR-10394-5p 0 1 0
chr4:3512835|3513036 hsa-miR-891a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr4:3512835|3513036
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MSTEMPRPRAQVLHAGLFPAGLGSPMPSEFVVPSSGDPAGQVLQMLLH
Nucleotide Sequence CTGTCCACGGAAATGCCACGGCCAAGAGCCCAGGTCCTTCACGCTGGCCTCTTCCCTGCCGGGCTGGGCTCCCCAATGCCTTCAGAGTTCGTTGTGCCGAGCTCTGGAGATCCTGCCGGACAGGTCCTGCAGATGCTTCTTCAC
CircID chr4:3512835|3513036
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MTAGCPRKCHGQEPRSFTLASSLPGWAPQCLQSSLCRALEILPDRSCRCFF
Nucleotide Sequence CTGACGGCGGGCTGTCCACGGAAATGCCACGGCCAAGAGCCCAGGTCCTTCACGCTGGCCTCTTCCCTGCCGGGCTGGGCTCCCCAATGCCTTCAGAGTTCGTTGTGCCGAGCTCTGGAGATCCTGCCGGACAGGTCCTGCAGATGCTTCTTC
CircID chr4:3512835|3513036
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MGSWPWHFRGQPAVRVAGAGTGVEAGRIVS
Nucleotide Sequence CTGGGCTCTTGGCCGTGGCATTTCCGTGGACAGCCCGCCGTCAGGGTGGCTGGGGCTGGCACGGGTGTCGAGGCAGGAAGGATTGTTTCT
CircID chr4:3512835|3513036
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MKALGSPARQGRGQREGPGLLAVAFPWTARRQGGWGWHGCRGRKDCF
Nucleotide Sequence CTGAAGGCATTGGGGAGCCCAGCCCGGCAGGGAAGAGGCCAGCGTGAAGGACCTGGGCTCTTGGCCGTGGCATTTCCGTGGACAGCCCGCCGTCAGGGTGGCTGGGGCTGGCACGGGTGTCGAGGCAGGAAGGATTGTTTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab