CircNet

General Information

circRNA Basic Information

CircID	chr4:38697767\|38697945
Strand	+
CircType	exon
Host Gene	ENSG00000109787.11;
Algorism	CIRI2;
Sequence	CCTTCCCTTGAACTGCTACACATCACCCACCTAGATCGAAAGTTTGGGCTCATCTCCCATTGGTGGCAAAGACCTCCATATGAGCTGCAGGCACAAAGGAGGGCAAAGAACTCGATTCAGATGAAGTCTAAGATCCAGGTTGACAAGATTTGTGAAGAATGACGGAAGAGGTGACTGCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:38697767\|38697945	hsa-miR-143-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-143-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-412-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-412-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-505-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-505-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-619-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-619-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-1301-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-1301-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-874-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-874-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-1236-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-1236-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-1262	0	1	1
chr4:38697767\|38697945	hsa-miR-513b-5p	0	0	1
chr4:38697767\|38697945	hsa-miR-513b-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-1225-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-1184	0	0	1
chr4:38697767\|38697945	hsa-miR-490-3p	1	1	1
chr4:38697767\|38697945	hsa-miR-1233	0	0	1
chr4:38697767\|38697945	hsa-miR-550	0	0	1
chr4:38697767\|38697945	hsa-miR-151-3p	0	0	1
chr4:38697767\|38697945	hsa-miR-2113	0	1	0
chr4:38697767\|38697945	hsa-miR-935	0	1	0
chr4:38697767\|38697945	hsa-miR-3137	1	0	0
chr4:38697767\|38697945	hsa-miR-4290	0	1	0
chr4:38697767\|38697945	hsa-miR-4660	0	1	0
chr4:38697767\|38697945	hsa-miR-1843	1	1	0
chr4:38697767\|38697945	hsa-miR-12116	1	0	0
chr4:38697767\|38697945	hsa-miR-6881-3p	0	1	0
chr4:38697767\|38697945	hsa-miR-5187-3p	0	1	0
chr4:38697767\|38697945	hsa-miR-3614-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-4667-3p	0	1	0
chr4:38697767\|38697945	hsa-miR-193a-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-6802-5p	0	1	0
chr4:38697767\|38697945	hsa-miR-550b-2-5p	0	1	0
chr4:38697767\|38697945	hsa-miR-4802-5p	0	1	0
chr4:38697767\|38697945	hsa-miR-6769b-5p	0	1	0
chr4:38697767\|38697945	hsa-miR-6752-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-6769a-5p	0	1	0
chr4:38697767\|38697945	hsa-miR-6803-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-6851-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-7110-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-6754-3p	1	0	0
chr4:38697767\|38697945	hsa-miR-4701-3p	1	1	0
chr4:38697767\|38697945	hsa-miR-4665-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-550a-5p	1	0	0
chr4:38697767\|38697945	hsa-miR-5009-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:38697767\|38697945
ORF Type	ORF1
Protein Length	49
Nucleotide Length	150
Protein Sequence	MLHITHLDRKFGLISHWWQRPPYELQAQRRAKNSIQMKSKIQVDKICEE
Nucleotide Sequence	CTGCTACACATCACCCACCTAGATCGAAAGTTTGGGCTCATCTCCCATTGGTGGCAAAGACCTCCATATGAGCTGCAGGCACAAAGGAGGGCAAAGAACTCGATTCAGATGAAGTCTAAGATCCAGGTTGACAAGATTTGTGAAGAATGA

CircID	chr4:38697767\|38697945
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	MGSSPIGGKDLHMSCRHKGGQRTRFR
Nucleotide Sequence	TTGGGCTCATCTCCCATTGGTGGCAAAGACCTCCATATGAGCTGCAGGCACAAAGGAGGGCAAAGAACTCGATTCAGATGA

CircID	chr4:38697767\|38697945
ORF Type	ORF3
Protein Length	35
Nucleotide Length	108
Protein Sequence	MDLRLHLNRVLCPPLCLQLIWRSLPPMGDEPKLSI
Nucleotide Sequence	CTGGATCTTAGACTTCATCTGAATCGAGTTCTTTGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCAAACTTTCGATCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information