CircNet

General Information

circRNA Basic Information

CircID	chr4:39577639\|39577879
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CAGCTCTTGGCAAGATGTCCCAAAGACTTACCGTAGCTTGGTCTAAGATGAAGTTGCTTCTCTTAGCCAGGCTCCTGATAATTTCTTTCATTCTTGATTGTGTTTGTGAGTACGTGTACAAAGGCACTCATTTTTCATTTAAAACTGAAAGGAGGCCAAGCACAGTGGCTCACACCTAAATCCCAGCACTTTAGGAGGCCGAAGTGGGAGGATCACTTGAGGTCACGAGTTCAAGACCAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr4:39577639\|39577879	hsa-miR-17-5p	0	1
chr4:39577639\|39577879	hsa-miR-17-3p	0	1
chr4:39577639\|39577879	hsa-miR-20a-5p	0	1
chr4:39577639\|39577879	hsa-miR-20a-3p	0	1
chr4:39577639\|39577879	hsa-miR-93-5p	0	1
chr4:39577639\|39577879	hsa-miR-93-3p	0	1
chr4:39577639\|39577879	hsa-miR-106a-5p	0	1
chr4:39577639\|39577879	hsa-miR-106a-3p	0	1
chr4:39577639\|39577879	hsa-miR-106b-5p	0	1
chr4:39577639\|39577879	hsa-miR-106b-3p	0	1
chr4:39577639\|39577879	hsa-miR-302a-5p	0	1
chr4:39577639\|39577879	hsa-miR-302a-3p	0	1
chr4:39577639\|39577879	hsa-miR-302b-5p	0	1
chr4:39577639\|39577879	hsa-miR-302b-3p	0	1
chr4:39577639\|39577879	hsa-miR-302c-5p	0	1
chr4:39577639\|39577879	hsa-miR-302c-3p	0	1
chr4:39577639\|39577879	hsa-miR-302d-5p	0	1
chr4:39577639\|39577879	hsa-miR-302d-3p	0	1
chr4:39577639\|39577879	hsa-miR-372-5p	0	1
chr4:39577639\|39577879	hsa-miR-372-3p	0	1
chr4:39577639\|39577879	hsa-miR-373-5p	0	1
chr4:39577639\|39577879	hsa-miR-373-3p	0	1
chr4:39577639\|39577879	hsa-miR-335-5p	0	1
chr4:39577639\|39577879	hsa-miR-335-3p	0	1
chr4:39577639\|39577879	hsa-miR-20b-5p	0	1
chr4:39577639\|39577879	hsa-miR-20b-3p	0	1
chr4:39577639\|39577879	hsa-miR-520e-5p	0	1
chr4:39577639\|39577879	hsa-miR-520e-3p	0	1
chr4:39577639\|39577879	hsa-miR-519e-5p	0	1
chr4:39577639\|39577879	hsa-miR-519e-3p	0	1
chr4:39577639\|39577879	hsa-miR-520b-5p	0	1
chr4:39577639\|39577879	hsa-miR-520b-3p	0	1
chr4:39577639\|39577879	hsa-miR-519d-5p	0	1
chr4:39577639\|39577879	hsa-miR-519d-3p	0	1
chr4:39577639\|39577879	hsa-miR-636	0	1
chr4:39577639\|39577879	hsa-miR-1264	0	1
chr4:39577639\|39577879	hsa-miR-891b	0	1
chr4:39577639\|39577879	hsa-miR-1234-3p	0	1
chr4:39577639\|39577879	hsa-miR-302e	0	1
chr4:39577639\|39577879	hsa-miR-1234	0	1
chr4:39577639\|39577879	hsa-miR-512-3p	0	1
chr4:39577639\|39577879	hsa-miR-532-3p	0	1
chr4:39577639\|39577879	hsa-miR-361-5p	0	1
chr4:39577639\|39577879	hsa-miR-515-3p	0	1
chr4:39577639\|39577879	hsa-miR-1302	0	1
chr4:39577639\|39577879	hsa-miR-520d-3p	0	1
chr4:39577639\|39577879	hsa-miR-520a-3p	0	1
chr4:39577639\|39577879	hsa-miR-520c-3p	0	1
chr4:39577639\|39577879	hsa-miR-9	0	1
chr4:39577639\|39577879	hsa-miR-218	0	1
chr4:39577639\|39577879	hsa-miR-1245	0	1
chr4:39577639\|39577879	hsa-miR-924	1	0
chr4:39577639\|39577879	hsa-miR-4452	1	0
chr4:39577639\|39577879	hsa-miR-6727-5p	1	0
chr4:39577639\|39577879	hsa-miR-23a-5p	1	0
chr4:39577639\|39577879	hsa-miR-450a-2-3p	1	0
chr4:39577639\|39577879	hsa-miR-4695-3p	1	0
chr4:39577639\|39577879	hsa-miR-660-3p	1	0
chr4:39577639\|39577879	hsa-miR-6775-5p	1	0
chr4:39577639\|39577879	hsa-miR-6722-3p	1	0
chr4:39577639\|39577879	hsa-miR-6877-3p	1	0
chr4:39577639\|39577879	hsa-miR-4757-5p	1	0
chr4:39577639\|39577879	hsa-miR-6829-3p	1	0
chr4:39577639\|39577879	hsa-miR-3150b-5p	1	0
chr4:39577639\|39577879	hsa-miR-6781-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:39577639\|39577879
ORF Type	ORF1
Protein Length	49
Nucleotide Length	147
Protein Sequence	MIVFVSTCTKALIFHLKLKGGQAQWLTPKSQHFRRPKWEDHLRSRVQDQ
Nucleotide Sequence	TTGATTGTGTTTGTGAGTACGTGTACAAAGGCACTCATTTTTCATTTAAAACTGAAAGGAGGCCAAGCACAGTGGCTCACACCTAAATCCCAGCACTTTAGGAGGCCGAAGTGGGAGGATCACTTGAGGTCACGAGTTCAAGACCAG

CircID	chr4:39577639\|39577879
ORF Type	ORF2
Protein Length	54
Nucleotide Length	165
Protein Sequence	MSQRLTVAWSKMKLLLLARLLIISFILDCVCEYVYKGTHFSFKTERRPSTVAHT
Nucleotide Sequence	ATGTCCCAAAGACTTACCGTAGCTTGGTCTAAGATGAAGTTGCTTCTCTTAGCCAGGCTCCTGATAATTTCTTTCATTCTTGATTGTGTTTGTGAGTACGTGTACAAAGGCACTCATTTTTCATTTAAAACTGAAAGGAGGCCAAGCACAGTGGCTCACACCTAA

CircID	chr4:39577639\|39577879
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MYTYSQTQSRMKEIIRSLAKRSNFILDQATVSLWDILPRA
Nucleotide Sequence	TTGTACACGTACTCACAAACACAATCAAGAATGAAAGAAATTATCAGGAGCCTGGCTAAGAGAAGCAACTTCATCTTAGACCAAGCTACGGTAAGTCTTTGGGACATCTTGCCAAGAGCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information