CircNet

General Information

circRNA Basic Information

CircID	chr4:40424620\|40424809
Strand	-
CircType	exon
Host Gene	ENSG00000163694.13;
Algorism	CIRI2;
Sequence	ACCCCAATCCAGTTCACCCATCAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAAACATGGTAAGGCAACTAGAAGCATAACTTTCTGCTGAAAAGAGTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:40424620\|40424809	hsa-miR-214-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-214-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-186-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-186-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-494-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-494-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-522-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-522-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-527	-1	0	1
chr4:40424620\|40424809	hsa-miR-487b-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-487b-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-567	-8	0	1
chr4:40424620\|40424809	hsa-miR-578	-7	0	1
chr4:40424620\|40424809	hsa-miR-609	-13	0	1
chr4:40424620\|40424809	hsa-miR-1323	-3	0	1
chr4:40424620\|40424809	hsa-miR-922	-4	0	1
chr4:40424620\|40424809	hsa-miR-297	-1	0	1
chr4:40424620\|40424809	hsa-miR-1236-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-1236-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-548e-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-548e-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-1243	0	0	1
chr4:40424620\|40424809	hsa-miR-548g-5p	0	0	1
chr4:40424620\|40424809	hsa-miR-548g-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-1262	0	1	1
chr4:40424620\|40424809	hsa-miR-548o-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-548o	0	0	1
chr4:40424620\|40424809	hsa-miR-361-3p	-7	1	1
chr4:40424620\|40424809	hsa-miR-518a-5p	-1	0	1
chr4:40424620\|40424809	hsa-miR-548a-3p	0	0	1
chr4:40424620\|40424809	hsa-miR-548f	0	0	1
chr4:40424620\|40424809	hsa-miR-3935	-5	1	0
chr4:40424620\|40424809	hsa-miR-154-5p	-8	1	0
chr4:40424620\|40424809	hsa-miR-8071	0	1	0
chr4:40424620\|40424809	hsa-miR-6515-5p	1	0	0
chr4:40424620\|40424809	hsa-miR-4753-3p	-12	1	0
chr4:40424620\|40424809	hsa-miR-6782-5p	1	0	0
chr4:40424620\|40424809	hsa-miR-3667-5p	-7	1	0
chr4:40424620\|40424809	hsa-miR-6859-3p	-7	1	0
chr4:40424620\|40424809	hsa-miR-4423-5p	-9	1	0
chr4:40424620\|40424809	hsa-miR-6722-3p	1	0	0
chr4:40424620\|40424809	hsa-miR-4701-3p	0	1	0
chr4:40424620\|40424809	hsa-miR-1266-5p	1	0	0
chr4:40424620\|40424809	hsa-miR-6724-5p	1	0	0
chr4:40424620\|40424809	hsa-miR-6744-3p	-14	1	0
chr4:40424620\|40424809	hsa-miR-130a-5p	-12	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:40424620\|40424809
ORF Type	ORF1
Protein Length	55
Nucleotide Length	168
Protein Sequence	MYVIVDKTPRDSFQQKVMLLVALPCFLQNCPWSSRVLETLCLLNGPLFLCCALDG
Nucleotide Sequence	ATGTATGTTATCGTAGACAAGACCCCCAGAGACTCTTTTCAGCAGAAAGTTATGCTTCTAGTTGCCTTACCATGTTTCTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTGATGGGTGA

CircID	chr4:40424620\|40424809
ORF Type	ORF2
Protein Length	29
Nucleotide Length	90
Protein Sequence	MFLAKLSMVLKGVGNIMFIKWASLPLLCT
Nucleotide Sequence	ATGTTTCTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information