CircRNA Information

General Information
circRNA Basic Information
CircID chr4:52713657|52713924
Strand +
CircType exon
Host Gene ENSG00000226950.5;
Algorism CIRI2;
Sequence CTCCCCCGTGCCACCCAGAGGGCTTCGGTGTAGCAAGTCTGGTGACCTTGCTATAGCGCCTAGATAACGGTTCAGGAATGCAGCTGCAGAGTATTCAGGGTAAGGGTCAGCTGCATTGAGTTAGCGGGGGCGGAGTGGTCCTGGGGCAGCCTGTCCCTAACAGAATCCACCTCCGAGTTGTGACAATTAAATGAAAAGGTTGAAAAGGTGAACATGAAGCACCTGCTACACTGCCCTGTTGCCACCAGCATTGTCACTGCTCTAGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:52713657|52713924 hsa-miR-10a-5p 0 0 1
chr4:52713657|52713924 hsa-miR-10a-3p 0 0 1
chr4:52713657|52713924 hsa-miR-10b-5p 0 0 1
chr4:52713657|52713924 hsa-miR-10b-3p 0 0 1
chr4:52713657|52713924 hsa-miR-34a-5p 0 0 1
chr4:52713657|52713924 hsa-miR-34a-3p 0 0 1
chr4:52713657|52713924 hsa-miR-221-5p 0 0 1
chr4:52713657|52713924 hsa-miR-221-3p 0 0 1
chr4:52713657|52713924 hsa-miR-222-5p 0 0 1
chr4:52713657|52713924 hsa-miR-222-3p 0 0 1
chr4:52713657|52713924 hsa-miR-326 0 0 1
chr4:52713657|52713924 hsa-miR-449a 0 1 1
chr4:52713657|52713924 hsa-miR-504-5p 0 0 1
chr4:52713657|52713924 hsa-miR-504-3p 0 0 1
chr4:52713657|52713924 hsa-miR-564 0 0 1
chr4:52713657|52713924 hsa-miR-579-5p 0 0 1
chr4:52713657|52713924 hsa-miR-579-3p 0 0 1
chr4:52713657|52713924 hsa-miR-645 0 0 1
chr4:52713657|52713924 hsa-miR-449b-5p 0 0 1
chr4:52713657|52713924 hsa-miR-449b-3p 0 0 1
chr4:52713657|52713924 hsa-miR-1301-5p 0 0 1
chr4:52713657|52713924 hsa-miR-1301-3p 0 0 1
chr4:52713657|52713924 hsa-miR-1226-5p 0 0 1
chr4:52713657|52713924 hsa-miR-1226-3p 0 0 1
chr4:52713657|52713924 hsa-miR-1200 0 0 1
chr4:52713657|52713924 hsa-miR-1205 0 0 1
chr4:52713657|52713924 hsa-miR-1293 0 0 1
chr4:52713657|52713924 hsa-miR-1305 0 0 1
chr4:52713657|52713924 hsa-miR-1258 0 0 1
chr4:52713657|52713924 hsa-miR-1184 0 0 1
chr4:52713657|52713924 hsa-miR-324-3p 0 0 1
chr4:52713657|52713924 hsa-miR-330-5p 0 0 1
chr4:52713657|52713924 hsa-miR-34c-5p 1 1 1
chr4:52713657|52713924 hsa-miR-138 0 0 1
chr4:52713657|52713924 hsa-miR-451 0 0 1
chr4:52713657|52713924 hsa-miR-608 1 1 0
chr4:52713657|52713924 hsa-miR-646 0 1 0
chr4:52713657|52713924 hsa-miR-764 0 1 0
chr4:52713657|52713924 hsa-miR-1291 1 0 0
chr4:52713657|52713924 hsa-miR-1913 0 1 0
chr4:52713657|52713924 hsa-miR-2278 0 1 0
chr4:52713657|52713924 hsa-miR-3137 1 0 0
chr4:52713657|52713924 hsa-miR-3135b 0 1 0
chr4:52713657|52713924 hsa-miR-4519 0 1 0
chr4:52713657|52713924 hsa-miR-3977 0 1 0
chr4:52713657|52713924 hsa-miR-5047 0 1 0
chr4:52713657|52713924 hsa-miR-5090 1 0 0
chr4:52713657|52713924 hsa-miR-5190 0 1 0
chr4:52713657|52713924 hsa-miR-8089 1 0 0
chr4:52713657|52713924 hsa-miR-12114 0 1 0
chr4:52713657|52713924 hsa-miR-4731-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6840-3p 0 1 0
chr4:52713657|52713924 hsa-miR-4700-3p 0 1 0
chr4:52713657|52713924 hsa-miR-671-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6799-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6727-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6776-5p 0 1 0
chr4:52713657|52713924 hsa-miR-7845-5p 0 1 0
chr4:52713657|52713924 hsa-miR-6793-5p 0 1 0
chr4:52713657|52713924 hsa-miR-6732-5p 1 0 0
chr4:52713657|52713924 hsa-miR-3130-3p 0 1 0
chr4:52713657|52713924 hsa-miR-5008-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6753-5p 1 0 0
chr4:52713657|52713924 hsa-miR-3614-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6823-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6789-5p 1 0 0
chr4:52713657|52713924 hsa-miR-4750-3p 0 1 0
chr4:52713657|52713924 hsa-miR-4433b-5p 0 1 0
chr4:52713657|52713924 hsa-miR-499b-5p 0 1 0
chr4:52713657|52713924 hsa-miR-155-5p 0 1 0
chr4:52713657|52713924 hsa-miR-6865-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6775-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6743-5p 1 0 0
chr4:52713657|52713924 hsa-miR-6815-5p 0 1 0
chr4:52713657|52713924 hsa-miR-6851-5p 0 1 0
chr4:52713657|52713924 hsa-miR-6879-5p 0 1 0
chr4:52713657|52713924 hsa-miR-6836-5p 1 0 0
chr4:52713657|52713924 hsa-miR-4632-5p 1 1 0
chr4:52713657|52713924 hsa-miR-4436b-3p 0 1 0
chr4:52713657|52713924 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr4:52713657|52713924
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MNRYLGAIARSPDLLHRSPLGGTGE
Nucleotide Sequence CTGAACCGTTATCTAGGCGCTATAGCAAGGTCACCAGACTTGCTACACCGAAGCCCTCTGGGTGGCACGGGGGAG

CircID chr4:52713657|52713924
ORF Type ORF2
Protein Length 59
Nucleotide Length 180
Protein Sequence MLVATGQCSRCFMFTFSTFSFNCHNSEVDSVRDRLPQDHSAPANSMQLTLTLNTLQLHS
Nucleotide Sequence ATGCTGGTGGCAACAGGGCAGTGTAGCAGGTGCTTCATGTTCACCTTTTCAACCTTTTCATTTAATTGTCACAACTCGGAGGTGGATTCTGTTAGGGACAGGCTGCCCCAGGACCACTCCGCCCCCGCTAACTCAATGCAGCTGACCCTTACCCTGAATACTCTGCAGCTGCATTCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites