CircNet

General Information

circRNA Basic Information

CircID	chr4:6078939\|6081755
Strand	-
CircType	exon
Host Gene	ENSG00000152969.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTGAAACGCTCACGAGAGACCGAGGTTCAGCTGAAGCCCCTGGTGGAGAAGAACAAGCGGATGAACAAGAAGAATGAGGATCTGTTGCAGAGTATCCAGAGGATGGAGGAGAAAATCAAGAACCTCACGCGGGAAAACGTGGAAATGAAAGAAAAGCTGTCAGCGCAGGCGTCTCTGAAGCGGCATACCTCCTTGAATGACCTCAGCCTGACGAGGGATGAGCAGGAGATCGAGTTCCTGAGGCTGCAGGTGCTGGAGCAGCAGCACGTCATTGACGACCTCTCACTGGAGAGAGAACGGCTGTTGCGCTCCAAAAGGCATCGAGGGAAAAGTCTGAAACCGCCCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:6078939\|6081755	hsa-miR-765	1	1	1
chr4:6078939\|6081755	hsa-miR-1270	1	1	1
chr4:6078939\|6081755	hsa-miR-3185	1	1	1
chr4:6078939\|6081755	hsa-miR-3665	1	1	1
chr4:6078939\|6081755	hsa-miR-3713	1	1	1
chr4:6078939\|6081755	hsa-miR-3937	1	1	1
chr4:6078939\|6081755	hsa-miR-2392	1	1	1
chr4:6078939\|6081755	hsa-miR-6765-5p	1	1	1
chr4:6078939\|6081755	hsa-miR-6894-5p	1	1	1
chr4:6078939\|6081755	hsa-miR-8071	1	1	1
chr4:6078939\|6081755	hsa-miR-6757-5p	1	1	1
chr4:6078939\|6081755	hsa-miR-6880-5p	1	1	1
chr4:6078939\|6081755	hsa-miR-7847-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:6078939\|6081755
ORF Type	ORF1
Protein Length	96
Nucleotide Length	288
Protein Sequence	MNKKNEDLLQSIQRMEEKIKNLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLERERLLRSKRHRGKSLKPPK
Nucleotide Sequence	ATGAACAAGAAGAATGAGGATCTGTTGCAGAGTATCCAGAGGATGGAGGAGAAAATCAAGAACCTCACGCGGGAAAACGTGGAAATGAAAGAAAAGCTGTCAGCGCAGGCGTCTCTGAAGCGGCATACCTCCTTGAATGACCTCAGCCTGACGAGGGATGAGCAGGAGATCGAGTTCCTGAGGCTGCAGGTGCTGGAGCAGCAGCACGTCATTGACGACCTCTCACTGGAGAGAGAACGGCTGTTGCGCTCCAAAAGGCATCGAGGGAAAAGTCTGAAACCGCCCAAG

CircID	chr4:6078939\|6081755
ORF Type	ORF2
Protein Length	82
Nucleotide Length	246
Protein Sequence	MTCCCSSTCSLRNSISCSSLVRLRSFKEVCRFRDACADSFSFISTFSRVRFLIFSSILWILCNRSSFFLFIRLFFSTRGFS*
Nucleotide Sequence	ATGACGTGCTGCTGCTCCAGCACCTGCAGCCTCAGGAACTCGATCTCCTGCTCATCCCTCGTCAGGCTGAGGTCATTCAAGGAGGTATGCCGCTTCAGAGACGCCTGCGCTGACAGCTTTTCTTTCATTTCCACGTTTTCCCGCGTGAGGTTCTTGATTTTCTCCTCCATCCTCTGGATACTCTGCAACAGATCCTCATTCTTCTTGTTCATCCGCTTGTTCTTCTCCACCAGGGGCTTCAGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites
chr4:6078939\|6081755	NOP56	1	0
chr4:6078939\|6081755	UPF1	1	0
chr4:6078939\|6081755	FUS	1	0
chr4:6078939\|6081755	TARDBP	0	1

CircRNA Information