CircNet

General Information

circRNA Basic Information

CircID	chr4:6333562\|6381094
Strand	-
CircType	exon
Host Gene	ENSG00000074211.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTGACATCATCTCTACCGTTGAGTTCAACCACACGGGAGAGCTGCTGGCCACAGGTGACAAGGGCGGCCGGGTCGTCATCTTCCAGCGGGAACCAGAGAGTAAAAATGCGCCCCACAGCCAGGGCGAATACGACGTGTACAGCACTTTCCAGAGCCACGAGCCGGAGTTTGACTATCTCAAGAGCCTGGAGATAGAGGAGAAGATCAACAAGATCAAGTGGCTCCCACAGCAGAACGCCGCCCACTCACTCCTGTCCACCAACG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:6333562\|6381094	hsa-miR-141-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:6333562\|6381094
ORF Type	ORF1
Protein Length	81
Nucleotide Length	243
Protein Sequence	VGGVLLWEPLDLVDLLLYLQALEIVKLRLVALESAVHVVFALAVGRIFTLWFPLEDDDPAALVTCGQQLSRVVELNGRDDV
Nucleotide Sequence	GTGGGCGGCGTTCTGCTGTGGGAGCCACTTGATCTTGTTGATCTTCTCCTCTATCTCCAGGCTCTTGAGATAGTCAAACTCCGGCTCGTGGCTCTGGAAAGTGCTGTACACGTCGTATTCGCCCTGGCTGTGGGGCGCATTTTTACTCTCTGGTTCCCGCTGGAAGATGACGACCCGGCCGCCCTTGTCACCTGTGGCCAGCAGCTCTCCCGTGTGGTTGAACTCAACGGTAGAGATGATGTC

CircID	chr4:6333562\|6381094
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MRPTARANTTCTALSRATSRSLTISRAWR*
Nucleotide Sequence	ATGCGCCCCACAGCCAGGGCGAATACGACGTGTACAGCACTTTCCAGAGCCACGAGCCGGAGTTTGACTATCTCAAGAGCCTGGAGATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:6333562\|6381094	NOP58	0	0	1
chr4:6333562\|6381094	AGO2	0	1	0
chr4:6333562\|6381094	CSTF2T	0	1	0
chr4:6333562\|6381094	DDX54	1	1	4
chr4:6333562\|6381094	TARDBP	1	0	0
chr4:6333562\|6381094	UPF1	0	2	0
chr4:6333562\|6381094	TAF15	3	1	0
chr4:6333562\|6381094	DKC1	0	1	0
chr4:6333562\|6381094	NUDT21	0	0	1
chr4:6333562\|6381094	IGF2BP2	0	0	1
chr4:6333562\|6381094	EWSR1	1	1	0
chr4:6333562\|6381094	EIF4A3	1	0	0
chr4:6333562\|6381094	FUS	7	3	0

CircRNA Information