CircRNA Information

General Information
circRNA Basic Information
CircID chr4:6642532|6642659
Strand +
CircType exon
Host Gene ENSG00000179010.13;
Algorism CIRI2;
Sequence CTCAAATATTTGTTAGGTCTGCTACTCAAATGAACTTACAGCTGGACAACGTATGAACCTTGAAGATGCCTCTTCTAGTCCAGTTTAGGGTCCAATGCAGACAGTTCCATACTGTCATCCCCAAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:6642532|6642659 hsa-miR-33a-5p 0 0 1
chr4:6642532|6642659 hsa-miR-33a-3p 0 0 1
chr4:6642532|6642659 hsa-miR-198 0 0 1
chr4:6642532|6642659 hsa-miR-144-5p 0 0 1
chr4:6642532|6642659 hsa-miR-144-3p 0 0 1
chr4:6642532|6642659 hsa-miR-346 0 0 1
chr4:6642532|6642659 hsa-miR-422a 0 0 1
chr4:6642532|6642659 hsa-miR-495-5p 0 0 1
chr4:6642532|6642659 hsa-miR-495-3p 0 0 1
chr4:6642532|6642659 hsa-miR-579-5p 0 0 1
chr4:6642532|6642659 hsa-miR-579-3p 0 0 1
chr4:6642532|6642659 hsa-miR-33b-5p 0 0 1
chr4:6642532|6642659 hsa-miR-33b-3p 0 0 1
chr4:6642532|6642659 hsa-miR-632 0 0 1
chr4:6642532|6642659 hsa-miR-548g-5p 0 0 1
chr4:6642532|6642659 hsa-miR-548g-3p 0 0 1
chr4:6642532|6642659 hsa-miR-485-3p 0 0 1
chr4:6642532|6642659 hsa-miR-378 0 0 1
chr4:6642532|6642659 hsa-miR-378b 0 1 0
chr4:6642532|6642659 hsa-miR-378c 0 1 0
chr4:6642532|6642659 hsa-miR-3654 0 1 0
chr4:6642532|6642659 hsa-miR-378e 0 1 0
chr4:6642532|6642659 hsa-miR-378f 0 1 0
chr4:6642532|6642659 hsa-miR-378i 0 1 0
chr4:6642532|6642659 hsa-miR-4539 0 1 0
chr4:6642532|6642659 hsa-miR-5187-5p 0 1 0
chr4:6642532|6642659 hsa-miR-6744-5p 0 1 0
chr4:6642532|6642659 hsa-miR-6732-5p 1 0 0
chr4:6642532|6642659 hsa-miR-4787-5p 1 0 0
chr4:6642532|6642659 hsa-miR-520g-5p 0 1 0
chr4:6642532|6642659 hsa-miR-6803-5p 1 0 0
chr4:6642532|6642659 hsa-miR-6751-5p 1 1 0
chr4:6642532|6642659 hsa-miR-6887-5p 1 0 0
chr4:6642532|6642659 hsa-miR-378a-3p 0 1 0
chr4:6642532|6642659 hsa-miR-323b-5p 0 1 0
chr4:6642532|6642659 hsa-miR-378d 0 1 0
chr4:6642532|6642659 hsa-miR-6839-5p 0 1 0
chr4:6642532|6642659 hsa-miR-452-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr4:6642532|6642659
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MGMTVWNCLHWTLNWTRRGIFKVHTLSSCKFI
Nucleotide Sequence TTGGGGATGACAGTATGGAACTGTCTGCATTGGACCCTAAACTGGACTAGAAGAGGCATCTTCAAGGTTCATACGTTGTCCAGCTGTAAGTTCATTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites