CircNet

General Information

circRNA Basic Information

CircID	chr4:7055968\|7056178
Strand	+
CircType	exon
Host Gene	ENSG00000173011.11;
Algorism	CIRI2;
Sequence	CCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCTGGCGCGGGCCTGGCGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGAAAGGTACTTGCAACTGAAGAAAATCCTGAGGAAGCTGACGCCAGAATTCAGAACTCTTAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:7055968\|7056178	hsa-miR-31-5p	0	0	1
chr4:7055968\|7056178	hsa-miR-31-3p	0	0	1
chr4:7055968\|7056178	hsa-miR-335-5p	0	0	1
chr4:7055968\|7056178	hsa-miR-335-3p	0	0	1
chr4:7055968\|7056178	hsa-miR-325	0	1	1
chr4:7055968\|7056178	hsa-miR-575	0	0	1
chr4:7055968\|7056178	hsa-miR-647	0	0	1
chr4:7055968\|7056178	hsa-miR-1290	0	0	1
chr4:7055968\|7056178	hsa-miR-876-3p	0	0	1
chr4:7055968\|7056178	hsa-miR-556-5p	0	0	1
chr4:7055968\|7056178	hsa-miR-516a-3p	0	0	1
chr4:7055968\|7056178	hsa-miR-661	1	0	0
chr4:7055968\|7056178	hsa-miR-663a	1	0	0
chr4:7055968\|7056178	hsa-miR-3686	0	1	0
chr4:7055968\|7056178	hsa-miR-4673	1	1	0
chr4:7055968\|7056178	hsa-miR-5787	1	0	0
chr4:7055968\|7056178	hsa-miR-6069	1	0	0
chr4:7055968\|7056178	hsa-miR-12115	1	1	0
chr4:7055968\|7056178	hsa-miR-22-5p	0	1	0
chr4:7055968\|7056178	hsa-miR-6089	1	0	0
chr4:7055968\|7056178	hsa-miR-6880-5p	1	1	0
chr4:7055968\|7056178	hsa-miR-4755-3p	0	1	0
chr4:7055968\|7056178	hsa-miR-7160-5p	0	1	0
chr4:7055968\|7056178	hsa-miR-6806-5p	1	1	0
chr4:7055968\|7056178	hsa-miR-6765-3p	1	0	0
chr4:7055968\|7056178	hsa-miR-6786-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-3186-5p	0	1	0
chr4:7055968\|7056178	hsa-miR-4707-3p	1	1	0
chr4:7055968\|7056178	hsa-miR-3677-3p	1	0	0
chr4:7055968\|7056178	hsa-miR-6501-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-4715-5p	0	1	0
chr4:7055968\|7056178	hsa-miR-670-3p	0	1	0
chr4:7055968\|7056178	hsa-miR-4649-3p	0	1	0
chr4:7055968\|7056178	hsa-miR-4485-5p	0	1	0
chr4:7055968\|7056178	hsa-miR-6756-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-6803-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-6851-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-10396b-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-4723-5p	1	0	0
chr4:7055968\|7056178	hsa-miR-6874-3p	0	1	0
chr4:7055968\|7056178	hsa-miR-4645-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:7055968\|7056178
ORF Type	ORF1
Protein Length	40
Nucleotide Length	120
Protein Sequence	MATLLQMPTSQAGMLIFSVERYLQLKKILRKLTPEFRTLS
Nucleotide Sequence	CTGGCGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGAAAGGTACTTGCAACTGAAGAAAATCCTGAGGAAGCTGACGCCAGAATTCAGAACTCTTAGC

CircID	chr4:7055968\|7056178
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MASLRPQLARAWRHSYRCLLARRACSYFQWKGTCN
Nucleotide Sequence	CTGGCTAGTCTGAGGCCTCAGCTGGCGCGGGCCTGGCGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGAAAGGTACTTGCAACTGA

CircID	chr4:7055968\|7056178
ORF Type	ORF3
Protein Length	45
Nucleotide Length	138
Protein Sequence	MNSGVSFLRIFFSCKYLSTENMSMPAWLVGICKSVARPAPAEASD
Nucleotide Sequence	CTGAATTCTGGCGTCAGCTTCCTCAGGATTTTCTTCAGTTGCAAGTACCTTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information