CircRNA Information

General Information
circRNA Basic Information
CircID chr4:7772727|7772984
Strand -
CircType exon
Host Gene ENSG00000272620.1;
Algorism CIRI2;
Sequence GCCCCAGAGCCACTCCACATTCTCTCTGGGTGCACTGGCCCTCGGCCACGCAAGGCCGCGCCAGCCTCCGAGGTGAGCCAGAAGGACACACACCTGTGGACTCGATGTCCCTGACTTGGGCTCGATGGCCAGCCCCAGGGTGACTCCGCCCGCCAGCGCTTTCTTCAGGCTCTCCTTGACCTCCGTCAGCTCCAGCTCCAGGCTGACACGCTCCGCCTCCTTCTGCCGGCACTCCTCCTCCAGCTGCTTCAGCTTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:7772727|7772984 hsa-miR-148a-5p 0 0 1
chr4:7772727|7772984 hsa-miR-148a-3p 0 0 1
chr4:7772727|7772984 hsa-miR-122-5p 0 0 1
chr4:7772727|7772984 hsa-miR-122-3p 0 0 1
chr4:7772727|7772984 hsa-miR-152-5p 0 0 1
chr4:7772727|7772984 hsa-miR-152-3p 0 0 1
chr4:7772727|7772984 hsa-miR-149-5p 0 0 1
chr4:7772727|7772984 hsa-miR-149-3p 0 0 1
chr4:7772727|7772984 hsa-miR-326 0 0 1
chr4:7772727|7772984 hsa-miR-148b-5p 0 0 1
chr4:7772727|7772984 hsa-miR-148b-3p 0 0 1
chr4:7772727|7772984 hsa-miR-518f-5p 0 0 1
chr4:7772727|7772984 hsa-miR-518f-3p 0 0 1
chr4:7772727|7772984 hsa-miR-518b 0 0 1
chr4:7772727|7772984 hsa-miR-518c-5p 0 0 1
chr4:7772727|7772984 hsa-miR-518c-3p 0 0 1
chr4:7772727|7772984 hsa-miR-518e-5p 0 0 1
chr4:7772727|7772984 hsa-miR-518e-3p 0 0 1
chr4:7772727|7772984 hsa-miR-552-5p 0 0 1
chr4:7772727|7772984 hsa-miR-552-3p 0 0 1
chr4:7772727|7772984 hsa-miR-637 0 0 1
chr4:7772727|7772984 hsa-miR-646 0 0 1
chr4:7772727|7772984 hsa-miR-765 1 1 1
chr4:7772727|7772984 hsa-miR-298 1 1 1
chr4:7772727|7772984 hsa-miR-760 0 1 1
chr4:7772727|7772984 hsa-miR-1237-5p 0 0 1
chr4:7772727|7772984 hsa-miR-1237-3p 0 0 1
chr4:7772727|7772984 hsa-miR-1204 0 0 1
chr4:7772727|7772984 hsa-miR-1248 0 0 1
chr4:7772727|7772984 hsa-miR-1825 0 0 1
chr4:7772727|7772984 hsa-miR-485-5p 0 1 1
chr4:7772727|7772984 hsa-miR-1207-3p 0 0 1
chr4:7772727|7772984 hsa-miR-330-5p 0 0 1
chr4:7772727|7772984 hsa-miR-518a-3p 0 0 1
chr4:7772727|7772984 hsa-miR-518d-3p 0 1 1
chr4:7772727|7772984 hsa-miR-1254 0 0 1
chr4:7772727|7772984 hsa-miR-24 0 0 1
chr4:7772727|7772984 hsa-miR-371-3p 0 0 1
chr4:7772727|7772984 hsa-miR-663 0 0 1
chr4:7772727|7772984 hsa-miR-601 1 0 0
chr4:7772727|7772984 hsa-miR-663a 1 0 0
chr4:7772727|7772984 hsa-miR-658 1 0 0
chr4:7772727|7772984 hsa-miR-762 1 1 0
chr4:7772727|7772984 hsa-miR-1469 1 0 0
chr4:7772727|7772984 hsa-miR-2861 1 0 0
chr4:7772727|7772984 hsa-miR-3185 1 0 0
chr4:7772727|7772984 hsa-miR-4254 0 1 0
chr4:7772727|7772984 hsa-miR-4281 1 0 0
chr4:7772727|7772984 hsa-miR-4292 0 1 0
chr4:7772727|7772984 hsa-miR-3652 1 0 0
chr4:7772727|7772984 hsa-miR-3936 1 0 0
chr4:7772727|7772984 hsa-miR-4428 0 1 0
chr4:7772727|7772984 hsa-miR-4430 1 0 0
chr4:7772727|7772984 hsa-miR-3135b 1 1 0
chr4:7772727|7772984 hsa-miR-4466 1 0 0
chr4:7772727|7772984 hsa-miR-4478 1 0 0
chr4:7772727|7772984 hsa-miR-4479 0 1 0
chr4:7772727|7772984 hsa-miR-4487 1 1 0
chr4:7772727|7772984 hsa-miR-4488 1 0 0
chr4:7772727|7772984 hsa-miR-4491 0 1 0
chr4:7772727|7772984 hsa-miR-4492 1 0 0
chr4:7772727|7772984 hsa-miR-4498 1 1 0
chr4:7772727|7772984 hsa-miR-4533 1 0 0
chr4:7772727|7772984 hsa-miR-4534 1 0 0
chr4:7772727|7772984 hsa-miR-1587 1 0 0
chr4:7772727|7772984 hsa-miR-4538 1 0 0
chr4:7772727|7772984 hsa-miR-4656 1 0 0
chr4:7772727|7772984 hsa-miR-4657 0 1 0
chr4:7772727|7772984 hsa-miR-4660 1 0 0
chr4:7772727|7772984 hsa-miR-4683 1 0 0
chr4:7772727|7772984 hsa-miR-4739 1 1 0
chr4:7772727|7772984 hsa-miR-4741 1 0 0
chr4:7772727|7772984 hsa-miR-4767 1 0 0
chr4:7772727|7772984 hsa-miR-4784 1 0 0
chr4:7772727|7772984 hsa-miR-5698 1 0 0
chr4:7772727|7772984 hsa-miR-6081 1 1 0
chr4:7772727|7772984 hsa-miR-6085 1 0 0
chr4:7772727|7772984 hsa-miR-6088 1 0 0
chr4:7772727|7772984 hsa-miR-6125 1 0 0
chr4:7772727|7772984 hsa-miR-6127 1 0 0
chr4:7772727|7772984 hsa-miR-6133 1 0 0
chr4:7772727|7772984 hsa-miR-8072 1 0 0
chr4:7772727|7772984 hsa-miR-8073 1 0 0
chr4:7772727|7772984 hsa-miR-12114 1 0 0
chr4:7772727|7772984 hsa-miR-12115 1 0 0
chr4:7772727|7772984 hsa-miR-12128 1 1 0
chr4:7772727|7772984 hsa-miR-4433b-3p 1 1 0
chr4:7772727|7772984 hsa-miR-500b-3p 0 1 0
chr4:7772727|7772984 hsa-miR-504-3p 1 1 0
chr4:7772727|7772984 hsa-miR-4433a-3p 1 0 0
chr4:7772727|7772984 hsa-miR-6765-5p 1 0 0
chr4:7772727|7772984 hsa-miR-671-5p 1 0 0
chr4:7772727|7772984 hsa-miR-7106-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6825-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6894-5p 1 0 0
chr4:7772727|7772984 hsa-miR-25-5p 0 1 0
chr4:7772727|7772984 hsa-miR-6799-5p 1 0 0
chr4:7772727|7772984 hsa-miR-766-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6804-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6089 1 0 0
chr4:7772727|7772984 hsa-miR-6880-5p 1 0 0
chr4:7772727|7772984 hsa-miR-7847-3p 1 0 0
chr4:7772727|7772984 hsa-miR-4695-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6746-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4722-5p 1 0 0
chr4:7772727|7772984 hsa-miR-1301-3p 1 0 0
chr4:7772727|7772984 hsa-miR-7160-5p 1 0 0
chr4:7772727|7772984 hsa-miR-3187-3p 0 1 0
chr4:7772727|7772984 hsa-miR-3180-3p 1 1 0
chr4:7772727|7772984 hsa-miR-185-3p 1 1 0
chr4:7772727|7772984 hsa-miR-6732-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6805-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6827-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6798-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6760-5p 0 1 0
chr4:7772727|7772984 hsa-miR-6782-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6874-5p 0 1 0
chr4:7772727|7772984 hsa-miR-4738-3p 0 1 0
chr4:7772727|7772984 hsa-miR-1909-5p 1 1 0
chr4:7772727|7772984 hsa-miR-4640-5p 0 1 0
chr4:7772727|7772984 hsa-miR-4690-5p 1 0 0
chr4:7772727|7772984 hsa-miR-3677-3p 1 0 0
chr4:7772727|7772984 hsa-miR-6749-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4787-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4446-3p 1 0 0
chr4:7772727|7772984 hsa-miR-6781-5p 1 0 0
chr4:7772727|7772984 hsa-miR-3190-5p 0 1 0
chr4:7772727|7772984 hsa-miR-6895-5p 0 1 0
chr4:7772727|7772984 hsa-miR-7846-3p 1 0 0
chr4:7772727|7772984 hsa-miR-4750-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4529-5p 0 1 0
chr4:7772727|7772984 hsa-miR-10400-5p 1 0 0
chr4:7772727|7772984 hsa-miR-1207-5p 1 0 0
chr4:7772727|7772984 hsa-miR-1233-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6778-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6787-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6816-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6870-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6893-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6775-5p 1 0 0
chr4:7772727|7772984 hsa-miR-1343-5p 1 0 0
chr4:7772727|7772984 hsa-miR-3180 1 0 0
chr4:7772727|7772984 hsa-miR-5001-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6726-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6743-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6752-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6754-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6803-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6813-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6842-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6851-5p 1 0 0
chr4:7772727|7772984 hsa-miR-7107-5p 1 0 0
chr4:7772727|7772984 hsa-miR-7110-5p 1 0 0
chr4:7772727|7772984 hsa-miR-11181-3p 1 1 0
chr4:7772727|7772984 hsa-miR-6751-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6763-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6879-5p 1 0 0
chr4:7772727|7772984 hsa-miR-7111-5p 1 0 0
chr4:7772727|7772984 hsa-miR-3620-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4728-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6780b-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6836-5p 1 0 0
chr4:7772727|7772984 hsa-miR-10396b-5p 1 0 0
chr4:7772727|7772984 hsa-miR-1909-3p 1 0 0
chr4:7772727|7772984 hsa-miR-328-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4632-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4649-5p 1 0 0
chr4:7772727|7772984 hsa-miR-4725-3p 1 0 0
chr4:7772727|7772984 hsa-miR-4726-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6729-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6777-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6794-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6846-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6848-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6858-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6889-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6831-5p 1 0 0
chr4:7772727|7772984 hsa-miR-939-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6511a-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6511b-5p 1 1 0
chr4:7772727|7772984 hsa-miR-6856-5p 0 1 0
chr4:7772727|7772984 hsa-miR-1914-3p 1 0 0
chr4:7772727|7772984 hsa-miR-3173-3p 1 0 0
chr4:7772727|7772984 hsa-miR-6891-5p 0 1 0
chr4:7772727|7772984 hsa-miR-6790-5p 1 0 0
chr4:7772727|7772984 hsa-miR-6791-5p 1 1 0
chr4:7772727|7772984 hsa-miR-33b-3p 1 0 0
chr4:7772727|7772984 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr4:7772727|7772984
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MGSMASPRVTPPASAFFRLSLTSVSSSSRLTRSASFCRHSSSSCFSF
Nucleotide Sequence TTGGGCTCGATGGCCAGCCCCAGGGTGACTCCGCCCGCCAGCGCTTTCTTCAGGCTCTCCTTGACCTCCGTCAGCTCCAGCTCCAGGCTGACACGCTCCGCCTCCTTCTGCCGGCACTCCTCCTCCAGCTGCTTCAGCTTC
CircID chr4:7772727|7772984
ORF Type ORF2
Protein Length 84
Nucleotide Length 252
Protein Sequence MKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQVCVLLAHLGGWRGLAWPRASAPRENVEWLWG
Nucleotide Sequence CTGAAGCAGCTGGAGGAGGAGTGCCGGCAGAAGGAGGCGGAGCGTGTCAGCCTGGAGCTGGAGCTGACGGAGGTCAAGGAGAGCCTGAAGAAAGCGCTGGCGGGCGGAGTCACCCTGGGGCTGGCCATCGAGCCCAAGTCAGGGACATCGAGTCCACAGGTGTGTGTCCTTCTGGCTCACCTCGGAGGCTGGCGCGGCCTTGCGTGGCCGAGGGCCAGTGCACCCAGAGAGAATGTGGAGTGGCTCTGGGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab