CircNet

General Information

circRNA Basic Information

CircID	chr4:77883242\|77887291
Strand	+
CircType	exon
Host Gene	ENSG00000169288.17;
Algorism	CIRI2;find_circ;DCC;
Sequence	GTCTGCAAAGAAAACAAAAAAAGGTGCTAAAGAAAAAACACCAGATGAGAAAAAAGATGAAATAGAAAAAATAAAAGCATATCCCTATATGGAAGGCGAACCTGAGGATGATGTCTATTTAAAACGCTTATACCCGAGACAGATATATGAGGTGGAGAAAGCTGTTCACTTACTTAAGAAATTTCAAATTCTTGACTTTACTAGTCCAAAGCAAAGTGTTTATCTTGATTTGACACTGGATATGGCACTGGGAAAGAAGAAAAACGTGGAGCCATTTACCAGTGTTCTTAGTTTGCCATACCCATTTGCTTCCGAAATCAATAAAGTTGCTGTATTTACAGAGAATGCATCAGAGGTCAAAATAGCGGAAGAAAATGGAGCTGCATTTGCAGGAGGCACTAGTCTGATACAGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:77883242\|77887291
ORF Type	ORF1
Protein Length	109
Nucleotide Length	327
Protein Sequence	MEGEPEDDVYLKRLYPRQIYEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKKKNVEPFTSVLSLPYPFASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQK
Nucleotide Sequence	ATGGAAGGCGAACCTGAGGATGATGTCTATTTAAAACGCTTATACCCGAGACAGATATATGAGGTGGAGAAAGCTGTTCACTTACTTAAGAAATTTCAAATTCTTGACTTTACTAGTCCAAAGCAAAGTGTTTATCTTGATTTGACACTGGATATGGCACTGGGAAAGAAGAAAAACGTGGAGCCATTTACCAGTGTTCTTAGTTTGCCATACCCATTTGCTTCCGAAATCAATAAAGTTGCTGTATTTACAGAGAATGCATCAGAGGTCAAAATAGCGGAAGAAAATGGAGCTGCATTTGCAGGAGGCACTAGTCTGATACAGAAG

CircID	chr4:77883242\|77887291
ORF Type	ORF2
Protein Length	60
Nucleotide Length	180
Protein Sequence	VPPANAAPFSSAILTSDAFSVNTATLLISEANGYGKLRTLVNGSTFFFFPSAISSVKSR*
Nucleotide Sequence	GTGCCTCCTGCAAATGCAGCTCCATTTTCTTCCGCTATTTTGACCTCTGATGCATTCTCTGTAAATACAGCAACTTTATTGATTTCGGAAGCAAATGGGTATGGCAAACTAAGAACACTGGTAAATGGCTCCACGTTTTTCTTCTTTCCCAGTGCCATATCCAGTGTCAAATCAAGATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:77883242\|77887291	U2AF2	1	2	0
chr4:77883242\|77887291	ELAVL1	4	3	4
chr4:77883242\|77887291	SF3B1	0	1	0
chr4:77883242\|77887291	CELF2	3	4	0
chr4:77883242\|77887291	CNBP	0	0	1
chr4:77883242\|77887291	UPF1	1	0	0
chr4:77883242\|77887291	CPSF6	1	0	0
chr4:77883242\|77887291	NOP58	1	0	3
chr4:77883242\|77887291	KHSRP	0	3	0
chr4:77883242\|77887291	NOP56	1	0	0
chr4:77883242\|77887291	DDX54	0	0	2
chr4:77883242\|77887291	RBM10	1	0	0
chr4:77883242\|77887291	HNRNPM	0	2	0
chr4:77883242\|77887291	PTBP1	4	5	0
chr4:77883242\|77887291	HNRNPC	8	2	1
chr4:77883242\|77887291	HNRNPD	1	0	0
chr4:77883242\|77887291	IGF2BP2	0	0	2
chr4:77883242\|77887291	TARDBP	0	4	0
chr4:77883242\|77887291	RBFOX2	0	1	0
chr4:77883242\|77887291	CSTF2T	1	2	0
chr4:77883242\|77887291	CSTF2	1	2	0
chr4:77883242\|77887291	AGO2	1	0	0
chr4:77883242\|77887291	ATXN2	0	1	0
chr4:77883242\|77887291	EIF4A3	0	1	6
chr4:77883242\|77887291	FBL	0	1	0

CircRNA Information