CircNet

General Information

circRNA Basic Information

CircID	chr4:80024476\|80024579
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CATGTTTCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGCCAACCACCCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACAGTGTCCAGTGCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:80024476\|80024579	hsa-miR-494-5p	0	0	1
chr4:80024476\|80024579	hsa-miR-494-3p	0	0	1
chr4:80024476\|80024579	hsa-miR-661	0	0	1
chr4:80024476\|80024579	hsa-miR-665	0	1	1
chr4:80024476\|80024579	hsa-miR-1293	0	0	1
chr4:80024476\|80024579	hsa-miR-1225-3p	0	0	1
chr4:80024476\|80024579	hsa-miR-769-5p	0	0	1
chr4:80024476\|80024579	hsa-miR-876-3p	0	0	1
chr4:80024476\|80024579	hsa-miR-1233	0	0	1
chr4:80024476\|80024579	hsa-miR-24	0	0	1
chr4:80024476\|80024579	hsa-miR-886-3p	0	0	1
chr4:80024476\|80024579	hsa-miR-4318	0	1	0
chr4:80024476\|80024579	hsa-miR-3654	0	1	0
chr4:80024476\|80024579	hsa-miR-6840-3p	0	1	0
chr4:80024476\|80024579	hsa-miR-6854-5p	0	1	0
chr4:80024476\|80024579	hsa-miR-4786-5p	0	1	0
chr4:80024476\|80024579	hsa-miR-6089	1	1	0
chr4:80024476\|80024579	hsa-miR-1226-5p	1	0	0
chr4:80024476\|80024579	hsa-miR-6514-3p	0	1	0
chr4:80024476\|80024579	hsa-miR-4638-3p	1	1	0
chr4:80024476\|80024579	hsa-miR-6847-3p	0	1	0
chr4:80024476\|80024579	hsa-miR-1233-5p	1	1	0
chr4:80024476\|80024579	hsa-miR-1273h-5p	1	1	0
chr4:80024476\|80024579	hsa-miR-6756-5p	1	0	0
chr4:80024476\|80024579	hsa-miR-6769a-5p	1	0	0
chr4:80024476\|80024579	hsa-miR-10401-5p	1	0	0
chr4:80024476\|80024579	hsa-miR-6779-5p	1	0	0
chr4:80024476\|80024579	hsa-miR-6780a-5p	0	1	0
chr4:80024476\|80024579	hsa-miR-328-5p	1	0	0
chr4:80024476\|80024579	hsa-miR-6773-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:80024476\|80024579
ORF Type	ORF1
Protein Length	25
Nucleotide Length	75
Protein Sequence	MGSSQPPALASQSVGITGMSHSVQC
Nucleotide Sequence	CTGGGCTCAAGCCAACCACCCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACAGTGTCCAGTGC

CircID	chr4:80024476\|80024579
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MFPRLVSNSWAQANHPPWPPKVLGLQA
Nucleotide Sequence	ATGTTTCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGCCAACCACCCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGA

CircID	chr4:80024476\|80024579
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MWLMPVIPTLWEAKAGGWLEPRSLRPAWET
Nucleotide Sequence	CTGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCCAAGGCGGGTGGTTGGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGAAACA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information