CircNet

General Information

circRNA Basic Information

CircID	chr4:82484867\|82485040
Strand	+
CircType	exon
Host Gene	ENSG00000249242.6;
Algorism	CIRI2;
Sequence	GGAAATTGTATTGAGATGTGACCCTGTGTCGCCTGTGGAAAGGCATAGTGAGAAGAACTTTCCCACGAAAGCCCCCTTCATCGTTGTTCAGTGGTCGGCTGTGTGGATCCCAGGAGAGACATATGCCACAGACTGTGAGAGCAAAGCCCGCCGCTGTGATCTGGACTTGATGCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:82484867\|82485040	hsa-miR-27a-5p	0	0	1
chr4:82484867\|82485040	hsa-miR-27a-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-198	0	0	1
chr4:82484867\|82485040	hsa-miR-27b-5p	0	0	1
chr4:82484867\|82485040	hsa-miR-27b-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-593-5p	0	0	1
chr4:82484867\|82485040	hsa-miR-593-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-622	0	0	1
chr4:82484867\|82485040	hsa-miR-638	0	0	1
chr4:82484867\|82485040	hsa-miR-942-5p	0	0	1
chr4:82484867\|82485040	hsa-miR-942-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-1229-5p	0	0	1
chr4:82484867\|82485040	hsa-miR-1229-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-532-5p	0	0	1
chr4:82484867\|82485040	hsa-miR-654-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-769-3p	0	1	1
chr4:82484867\|82485040	hsa-miR-450b-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-342-3p	0	0	1
chr4:82484867\|82485040	hsa-miR-128	0	0	1
chr4:82484867\|82485040	hsa-miR-220c	0	0	1
chr4:82484867\|82485040	hsa-miR-1273	0	0	1
chr4:82484867\|82485040	hsa-miR-587	1	0	0
chr4:82484867\|82485040	hsa-miR-3937	1	0	0
chr4:82484867\|82485040	hsa-miR-4734	1	0	0
chr4:82484867\|82485040	hsa-miR-4767	1	0	0
chr4:82484867\|82485040	hsa-miR-5100	0	1	0
chr4:82484867\|82485040	hsa-miR-10226	0	1	0
chr4:82484867\|82485040	hsa-miR-12125	0	1	0
chr4:82484867\|82485040	hsa-miR-3692-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-181a-2-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-4711-5p	0	1	0
chr4:82484867\|82485040	hsa-miR-185-3p	1	0	0
chr4:82484867\|82485040	hsa-miR-6805-5p	1	1	0
chr4:82484867\|82485040	hsa-miR-1343-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-3677-3p	1	0	0
chr4:82484867\|82485040	hsa-miR-4713-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-6818-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-6886-5p	1	0	0
chr4:82484867\|82485040	hsa-miR-4661-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-1251-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-5584-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-10400-5p	1	0	0
chr4:82484867\|82485040	hsa-miR-7110-5p	1	0	0
chr4:82484867\|82485040	hsa-miR-10526-3p	1	0	0
chr4:82484867\|82485040	hsa-miR-328-5p	1	0	0
chr4:82484867\|82485040	hsa-miR-6846-5p	1	1	0
chr4:82484867\|82485040	hsa-miR-6848-5p	1	0	0
chr4:82484867\|82485040	hsa-miR-7107-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-6783-3p	0	1	0
chr4:82484867\|82485040	hsa-miR-619-5p	0	1	0
chr4:82484867\|82485040	hsa-miR-370-5p	0	1	0
chr4:82484867\|82485040	hsa-miR-181b-3p	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:82484867\|82485040
ORF Type	ORF1
Protein Length	54
Nucleotide Length	162
Protein Sequence	MRCDPVSPVERHSEKNFPTKAPFIVVQWSAVWIPGETYATDCESKARRCDLDLM
Nucleotide Sequence	TTGAGATGTGACCCTGTGTCGCCTGTGGAAAGGCATAGTGAGAAGAACTTTCCCACGAAAGCCCCCTTCATCGTTGTTCAGTGGTCGGCTGTGTGGATCCCAGGAGAGACATATGCCACAGACTGTGAGAGCAAAGCCCGCCGCTGTGATCTGGACTTGATG

CircID	chr4:82484867\|82485040
ORF Type	ORF2
Protein Length	48
Nucleotide Length	147
Protein Sequence	MCRLWKGIVRRTFPRKPPSSLFSGRLCGSQERHMPQTVRAKPAAVIWT
Nucleotide Sequence	CTGTGTCGCCTGTGGAAAGGCATAGTGAGAAGAACTTTCCCACGAAAGCCCCCTTCATCGTTGTTCAGTGGTCGGCTGTGTGGATCCCAGGAGAGACATATGCCACAGACTGTGAGAGCAAAGCCCGCCGCTGTGATCTGGACTTGA

CircID	chr4:82484867\|82485040
ORF Type	ORF3
Protein Length	27
Nucleotide Length	81
Protein Sequence	MKGAFVGKFFSLCLSTGDTGSHLNTIS
Nucleotide Sequence	ATGAAGGGGGCTTTCGTGGGAAAGTTCTTCTCACTATGCCTTTCCACAGGCGACACAGGGTCACATCTCAATACAATTTCC

CircID	chr4:82484867\|82485040
ORF Type	ORF4
Protein Length	30
Nucleotide Length	90
Protein Sequence	MNNDEGGFRGKVLLTMPFHRRHRVTSQYNF
Nucleotide Sequence	CTGAACAACGATGAAGGGGGCTTTCGTGGGAAAGTTCTTCTCACTATGCCTTTCCACAGGCGACACAGGGTCACATCTCAATACAATTTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information