CircNet

General Information

circRNA Basic Information

CircID	chr4:87981533\|87981736
Strand	+
CircType	exon
Host Gene	ENSG00000118785.12;
Algorism	CIRI2;
Sequence	CTCGGCCATCATATGTGTCTACTGTGGGGACAACTGGAGTGAAAACTTCGGTTGCTGGCAGGTCCGTGGGAAAATCAGTGACCAGTTCATCAGATTCATCAGAATGGTGAGACTCATCAGACTGGTGAGAATCATCAGTGTCATCTACATCATCAGAGTCGTTCGAGTCAATGGAGTCCTGGCTGTCCACATGGTCATCATCAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:87981533\|87981736	hsa-miR-136-5p	0	0	1
chr4:87981533\|87981736	hsa-miR-136-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-425-5p	0	0	1
chr4:87981533\|87981736	hsa-miR-425-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-492	0	1	1
chr4:87981533\|87981736	hsa-miR-591	0	0	1
chr4:87981533\|87981736	hsa-miR-622	0	1	1
chr4:87981533\|87981736	hsa-miR-627-5p	0	0	1
chr4:87981533\|87981736	hsa-miR-627-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-662	0	0	1
chr4:87981533\|87981736	hsa-miR-411-5p	0	0	1
chr4:87981533\|87981736	hsa-miR-411-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-924	0	0	1
chr4:87981533\|87981736	hsa-miR-936	0	0	1
chr4:87981533\|87981736	hsa-miR-1226-5p	0	0	1
chr4:87981533\|87981736	hsa-miR-1226-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-1229-5p	0	0	1
chr4:87981533\|87981736	hsa-miR-1229-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-1202	0	0	1
chr4:87981533\|87981736	hsa-miR-1272	0	1	1
chr4:87981533\|87981736	hsa-miR-1322	0	0	1
chr4:87981533\|87981736	hsa-miR-145-5p	0	1	1
chr4:87981533\|87981736	hsa-miR-508-5p	0	1	1
chr4:87981533\|87981736	hsa-miR-188-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-483-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-582-3p	0	0	1
chr4:87981533\|87981736	hsa-miR-1260	0	0	1
chr4:87981533\|87981736	hsa-miR-3138	1	1	0
chr4:87981533\|87981736	hsa-miR-4431	0	1	0
chr4:87981533\|87981736	hsa-miR-4491	0	1	0
chr4:87981533\|87981736	hsa-miR-4502	1	1	0
chr4:87981533\|87981736	hsa-miR-4515	1	0	0
chr4:87981533\|87981736	hsa-miR-4663	1	0	0
chr4:87981533\|87981736	hsa-miR-8081	0	1	0
chr4:87981533\|87981736	hsa-miR-3925-3p	0	1	0
chr4:87981533\|87981736	hsa-miR-5580-3p	0	1	0
chr4:87981533\|87981736	hsa-miR-642b-3p	0	1	0
chr4:87981533\|87981736	hsa-miR-4722-3p	1	1	0
chr4:87981533\|87981736	hsa-miR-642a-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:87981533\|87981736
ORF Type	ORF1
Protein Length	33
Nucleotide Length	99
Protein Sequence	MVRLIRLVRIISVIYIIRVVRVNGVLAVHMVII
Nucleotide Sequence	ATGGTGAGACTCATCAGACTGGTGAGAATCATCAGTGTCATCTACATCATCAGAGTCGTTCGAGTCAATGGAGTCCTGGCTGTCCACATGGTCATCATC

CircID	chr4:87981533\|87981736
ORF Type	ORF2
Protein Length	41
Nucleotide Length	126
Protein Sequence	MTLMILTSLMSLTILMNLMNWSLIFPRTCQQPKFSLQLSPQ
Nucleotide Sequence	ATGACACTGATGATTCTCACCAGTCTGATGAGTCTCACCATTCTGATGAATCTGATGAACTGGTCACTGATTTTCCCACGGACCTGCCAGCAACCGAAGTTTTCACTCCAGTTGTCCCCACAGTAG

CircID	chr4:87981533\|87981736
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MVTDFPTDLPATEVFTPVVPTVDTYDGR
Nucleotide Sequence	CTGGTCACTGATTTTCCCACGGACCTGCCAGCAACCGAAGTTTTCACTCCAGTTGTCCCCACAGTAGACACATATGATGGCCGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information