CircNet

General Information

circRNA Basic Information

CircID	chr4:89020460\|89056988
Strand	-
CircType	exon
Host Gene	ENSG00000138640.14;
Algorism	CIRI2;find_circ;DCC;
Sequence	TTCTTCCAGACGCTTTCTGAGAGAATGGGGGCAGGAGCTCTAGCCATCTGTCAAAGTAAAGCAGCGGTTCGGCTGAAAGAAGACATGAAAAAGATAGTGGCAGTGCCATTAAATGAACAGAAGGATTTTACCTATCAGAAGTTATTTGGAGTCAGTCTCCAAGAACTTGAACGGCAGGGGCTCACCGAGAATGGCATTCCAGCAGTAGTGTGGAATATAGTGGAATATTTGACGCAGCATGGACTTACCCAAGAAGGTCTTTTTAGGGTGAATGGTAACGTGAAGGTGGTGGAACAACTTCGACTGAAGTTCGAGAGTGGAGTGCCCGTGGAGCTCGGGAAGGACGGTGATGTCTGCTCAGCAGCCAGTCTGTTGAAGCTGTTTCTGAGGGAGCTGCCTGACAGTCTGATCACCTCAGCGTTGCAGCCTCGATTCATTCAACTCTTTCAGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:89020460\|89056988	hsa-miR-127-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:89020460\|89056988
ORF Type	ORF1
Protein Length	142
Nucleotide Length	426
Protein Sequence	MGAGALAICQSKAAVRLKEDMKKIVAVPLNEQKDFTYQKLFGVSLQELERQGLTENGIPAVVWNIVEYLTQHGLTQEGLFRVNGNVKVVEQLRLKFESGVPVELGKDGDVCSAASLLKLFLRELPDSLITSALQPRFIQLFQ
Nucleotide Sequence	ATGGGGGCAGGAGCTCTAGCCATCTGTCAAAGTAAAGCAGCGGTTCGGCTGAAAGAAGACATGAAAAAGATAGTGGCAGTGCCATTAAATGAACAGAAGGATTTTACCTATCAGAAGTTATTTGGAGTCAGTCTCCAAGAACTTGAACGGCAGGGGCTCACCGAGAATGGCATTCCAGCAGTAGTGTGGAATATAGTGGAATATTTGACGCAGCATGGACTTACCCAAGAAGGTCTTTTTAGGGTGAATGGTAACGTGAAGGTGGTGGAACAACTTCGACTGAAGTTCGAGAGTGGAGTGCCCGTGGAGCTCGGGAAGGACGGTGATGTCTGCTCAGCAGCCAGTCTGTTGAAGCTGTTTCTGAGGGAGCTGCCTGACAGTCTGATCACCTCAGCGTTGCAGCCTCGATTCATTCAACTCTTTCAG

CircID	chr4:89020460\|89056988
ORF Type	ORF2
Protein Length	101
Nucleotide Length	303
Protein Sequence	MNRGCNAEVIRLSGSSLRNSFNRLAAEQTSPSFPSSTGTPLSNFSRSCSTTFTLPFTLKRPSWVSPCCVKYSTIFHTTAGMPFSVSPCRSSSWRLTPNNF*
Nucleotide Sequence	ATGAATCGAGGCTGCAACGCTGAGGTGATCAGACTGTCAGGCAGCTCCCTCAGAAACAGCTTCAACAGACTGGCTGCTGAGCAGACATCACCGTCCTTCCCGAGCTCCACGGGCACTCCACTCTCGAACTTCAGTCGAAGTTGTTCCACCACCTTCACGTTACCATTCACCCTAAAAAGACCTTCTTGGGTAAGTCCATGCTGCGTCAAATATTCCACTATATTCCACACTACTGCTGGAATGCCATTCTCGGTGAGCCCCTGCCGTTCAAGTTCTTGGAGACTGACTCCAAATAACTTCTGA

CircID	chr4:89020460\|89056988
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MALPLSFSCLLSAEPLLYFDRWLELLPPFSQKASGR
Nucleotide Sequence	ATGGCACTGCCACTATCTTTTTCATGTCTTCTTTCAGCCGAACCGCTGCTTTACTTTGACAGATGGCTAGAGCTCCTGCCCCCATTCTCTCAGAAAGCGTCTGGAAGA

CircID	chr4:89020460\|89056988
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLRQIFHYIPHYCWNAILGEPLPFKFLETDSK*
Nucleotide Sequence	ATGCTGCGTCAAATATTCCACTATATTCCACACTACTGCTGGAATGCCATTCTCGGTGAGCCCCTGCCGTTCAAGTTCTTGGAGACTGACTCCAAATAA

CircID	chr4:89020460\|89056988
ORF Type	ORF5
Protein Length	32
Nucleotide Length	96
Protein Sequence	MNRRILPIRSYLESVSKNLNGRGSPRMAFQQ*
Nucleotide Sequence	ATGAACAGAAGGATTTTACCTATCAGAAGTTATTTGGAGTCAGTCTCCAAGAACTTGAACGGCAGGGGCTCACCGAGAATGGCATTCCAGCAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:89020460\|89056988	RBM5	0	1	0
chr4:89020460\|89056988	NOP56	0	1	1
chr4:89020460\|89056988	MOV10	1	0	0
chr4:89020460\|89056988	ELAVL1	1	0	5
chr4:89020460\|89056988	CNBP	1	0	1
chr4:89020460\|89056988	UPF1	3	1	0
chr4:89020460\|89056988	TAF15	1	0	0
chr4:89020460\|89056988	FMR1	1	0	0
chr4:89020460\|89056988	FUS	0	1	0
chr4:89020460\|89056988	DGCR8	0	0	1
chr4:89020460\|89056988	SRSF1	0	0	1
chr4:89020460\|89056988	NOP58	0	1	2
chr4:89020460\|89056988	U2AF2	1	1	0
chr4:89020460\|89056988	HNRNPC	0	1	0
chr4:89020460\|89056988	RANGAP1	0	0	2
chr4:89020460\|89056988	LIN28B	0	2	0
chr4:89020460\|89056988	IGF2BP1	0	0	1
chr4:89020460\|89056988	IGF2BP2	1	0	6
chr4:89020460\|89056988	RBM22	1	0	0
chr4:89020460\|89056988	TIAL1	0	1	0
chr4:89020460\|89056988	AGO1	0	0	2
chr4:89020460\|89056988	EIF4A3	2	3	7
chr4:89020460\|89056988	FBL	1	1	2

CircRNA Information