CircRNA Information

General Information
circRNA Basic Information
CircID chr4:89800847|89801037
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGACCTTACTTTCCTCCCTCCCTGTTTCCTCTTTGTGGTGTTTCCACTGGCCAAACTCACAGCGTAGACAAAAGGAGTGCATTGATGTAGCAGTGGTTCTAATCCAGGGCCAATTGTGCTCCCAGGGAACATTAGTGGTTATCACAGCTCAGGGGAGGAAGGGAGAGGAGTGGAGTGCTACTATGATTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:89800847|89801037 hsa-miR-221-5p 0 0 1
chr4:89800847|89801037 hsa-miR-221-3p 0 0 1
chr4:89800847|89801037 hsa-miR-222-5p 0 0 1
chr4:89800847|89801037 hsa-miR-222-3p 0 0 1
chr4:89800847|89801037 hsa-miR-328-5p 0 0 1
chr4:89800847|89801037 hsa-miR-328-3p 0 0 1
chr4:89800847|89801037 hsa-miR-558 0 0 1
chr4:89800847|89801037 hsa-miR-559 0 0 1
chr4:89800847|89801037 hsa-miR-583 0 1 1
chr4:89800847|89801037 hsa-miR-588 0 0 1
chr4:89800847|89801037 hsa-miR-920 0 0 1
chr4:89800847|89801037 hsa-miR-934 0 0 1
chr4:89800847|89801037 hsa-miR-548j-5p 0 0 1
chr4:89800847|89801037 hsa-miR-548j-3p 0 0 1
chr4:89800847|89801037 hsa-miR-1291 0 1 1
chr4:89800847|89801037 hsa-miR-1321 0 0 1
chr4:89800847|89801037 hsa-miR-331-3p 0 0 1
chr4:89800847|89801037 hsa-miR-409-3p 0 0 1
chr4:89800847|89801037 hsa-miR-125a-5p 0 0 1
chr4:89800847|89801037 hsa-miR-483-3p 1 1 1
chr4:89800847|89801037 hsa-miR-548b-5p 0 0 1
chr4:89800847|89801037 hsa-miR-548d-5p 0 0 1
chr4:89800847|89801037 hsa-miR-548c-5p 0 0 1
chr4:89800847|89801037 hsa-miR-548a-5p 0 0 1
chr4:89800847|89801037 hsa-miR-548i 0 0 1
chr4:89800847|89801037 hsa-miR-1274a 0 0 1
chr4:89800847|89801037 hsa-miR-125b 0 0 1
chr4:89800847|89801037 hsa-miR-499-3p 0 0 1
chr4:89800847|89801037 hsa-miR-548h 0 0 1
chr4:89800847|89801037 hsa-miR-637 1 0 0
chr4:89800847|89801037 hsa-miR-658 1 0 0
chr4:89800847|89801037 hsa-miR-1538 1 0 0
chr4:89800847|89801037 hsa-miR-3125 0 1 0
chr4:89800847|89801037 hsa-miR-3141 1 0 0
chr4:89800847|89801037 hsa-miR-4261 0 1 0
chr4:89800847|89801037 hsa-miR-4270 1 1 0
chr4:89800847|89801037 hsa-miR-4462 1 0 0
chr4:89800847|89801037 hsa-miR-4510 0 1 0
chr4:89800847|89801037 hsa-miR-4651 1 0 0
chr4:89800847|89801037 hsa-miR-4675 1 1 0
chr4:89800847|89801037 hsa-miR-4682 1 0 0
chr4:89800847|89801037 hsa-miR-4689 1 0 0
chr4:89800847|89801037 hsa-miR-4706 1 0 0
chr4:89800847|89801037 hsa-miR-4739 1 1 0
chr4:89800847|89801037 hsa-miR-4779 1 0 0
chr4:89800847|89801037 hsa-miR-4780 1 0 0
chr4:89800847|89801037 hsa-miR-5193 0 1 0
chr4:89800847|89801037 hsa-miR-6088 1 0 0
chr4:89800847|89801037 hsa-miR-6090 1 0 0
chr4:89800847|89801037 hsa-miR-6124 1 0 0
chr4:89800847|89801037 hsa-miR-378j 0 1 0
chr4:89800847|89801037 hsa-miR-6133 1 1 0
chr4:89800847|89801037 hsa-miR-7703 0 1 0
chr4:89800847|89801037 hsa-miR-7974 1 0 0
chr4:89800847|89801037 hsa-miR-8078 1 0 0
chr4:89800847|89801037 hsa-miR-8085 1 0 0
chr4:89800847|89801037 hsa-miR-12118 1 0 0
chr4:89800847|89801037 hsa-miR-4435 1 1 0
chr4:89800847|89801037 hsa-miR-6749-3p 1 1 0
chr4:89800847|89801037 hsa-miR-7106-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6825-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6892-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6881-3p 1 1 0
chr4:89800847|89801037 hsa-miR-6510-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6873-5p 1 1 0
chr4:89800847|89801037 hsa-miR-4655-5p 1 0 0
chr4:89800847|89801037 hsa-miR-7110-3p 1 1 0
chr4:89800847|89801037 hsa-miR-6845-3p 1 0 0
chr4:89800847|89801037 hsa-miR-877-3p 1 1 0
chr4:89800847|89801037 hsa-miR-6798-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6782-5p 1 0 0
chr4:89800847|89801037 hsa-miR-4793-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6728-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6740-3p 1 0 0
chr4:89800847|89801037 hsa-miR-4436b-5p 1 0 0
chr4:89800847|89801037 hsa-miR-7109-5p 1 0 0
chr4:89800847|89801037 hsa-miR-7113-3p 1 0 0
chr4:89800847|89801037 hsa-miR-3667-3p 1 1 0
chr4:89800847|89801037 hsa-miR-7111-3p 1 1 0
chr4:89800847|89801037 hsa-miR-6780a-3p 1 0 0
chr4:89800847|89801037 hsa-miR-4446-5p 1 0 0
chr4:89800847|89801037 hsa-miR-149-3p 1 1 0
chr4:89800847|89801037 hsa-miR-3162-5p 1 0 0
chr4:89800847|89801037 hsa-miR-1236-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6867-3p 0 1 0
chr4:89800847|89801037 hsa-miR-5088-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6777-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6748-3p 1 0 0
chr4:89800847|89801037 hsa-miR-1249-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6800-3p 1 0 0
chr4:89800847|89801037 hsa-miR-1207-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6754-5p 1 0 0
chr4:89800847|89801037 hsa-miR-11181-3p 1 0 0
chr4:89800847|89801037 hsa-miR-1249-5p 1 1 0
chr4:89800847|89801037 hsa-miR-6779-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6780a-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6797-5p 1 1 0
chr4:89800847|89801037 hsa-miR-6808-5p 1 0 0
chr4:89800847|89801037 hsa-miR-7111-5p 1 1 0
chr4:89800847|89801037 hsa-miR-4685-3p 1 1 0
chr4:89800847|89801037 hsa-miR-4728-5p 1 1 0
chr4:89800847|89801037 hsa-miR-6777-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6795-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6883-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6887-5p 1 0 0
chr4:89800847|89801037 hsa-miR-324-3p 0 1 0
chr4:89800847|89801037 hsa-miR-3173-3p 1 1 0
chr4:89800847|89801037 hsa-miR-4747-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6891-5p 1 0 0
chr4:89800847|89801037 hsa-miR-6785-5p 1 1 0
chr4:89800847|89801037 hsa-miR-6756-3p 1 0 0
chr4:89800847|89801037 hsa-miR-3059-5p 1 0 0
chr4:89800847|89801037 hsa-miR-4723-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6769b-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6859-5p 0 1 0
chr4:89800847|89801037 hsa-miR-4691-5p 1 0 0
chr4:89800847|89801037 hsa-miR-5006-3p 1 0 0
chr4:89800847|89801037 hsa-miR-6833-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr4:89800847|89801037
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence LTLLSSLPVSSLWCFHWPNSQRRQKECIDVAVVLIQGQLCSQGTLVVITAQGRKGEEWSATMI
Nucleotide Sequence CTGACCTTACTTTCCTCCCTCCCTGTTTCCTCTTTGTGGTGTTTCCACTGGCCAAACTCACAGCGTAGACAAAAGGAGTGCATTGATGTAGCAGTGGTTCTAATCCAGGGCCAATTGTGCTCCCAGGGAACATTAGTGGTTATCACAGCTCAGGGGAGGAAGGGAGAGGAGTGGAGTGCTACTATGATT

CircID chr4:89800847|89801037
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MHSFCLRCEFGQWKHHKEETGREESKV
Nucleotide Sequence ATGCACTCCTTTTGTCTACGCTGTGAGTTTGGCCAGTGGAAACACCACAAAGAGGAAACAGGGAGGGAGGAAAGTAAGGTC

CircID chr4:89800847|89801037
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MFPGSTIGPGLEPLLHQCTPFVYAVSLASGNTTKRKQGGRKVRS
Nucleotide Sequence ATGTTCCCTGGGAGCACAATTGGCCCTGGATTAGAACCACTGCTACATCAATGCACTCCTTTTGTCTACGCTGTGAGTTTGGCCAGTGGAAACACCACAAAGAGGAAACAGGGAGGGAGGAAAGTAAGGTCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites