CircNet

General Information

circRNA Basic Information

CircID	chr4:90628025\|90815845
Strand	+
CircType	exon
Host Gene	ENSG00000184305.14;
Algorism	CIRI2;
Sequence	GAATCTTTCCCTGAAATTAACAAAGGACGTTGATCAAGAAGCCAGGTGTTCCCACATCAGCCGAATGCCCAACAGTCCATCTGCGGATTGGCCTCTACAAGGTGTGGAAGAAAACGGAGGCATAGATTCTCTGCCATTCAGACTGATGTTACAGGACTGCACGGCAGTCAAGACGTTATTATTAAAGATGAAGAGAGTTCTTCAAGAGAGTGCAGACATGAGTCCAGCAAGCAGTACCACGTCACTTCCTGTTAGTCCTCTTACTGAAGAGCCAGTGCCTTTCAAGAATATTCAGCATTATATCAACTGTACACACATATGGTCTGACACATGCCACTGCATCATTATAGAAGAGCCAAAGGATAACCAATTTTGCATAGGATATAATGAAAGATGAATGCTCGATGCTCAAGCTGCAGCTGAAAGAGAAGGATGAACTCATTTCCCAACTTCAGGAAGAGCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:90628025\|90815845	hsa-miR-103a-2-5p	0	1	1
chr4:90628025\|90815845	hsa-miR-143-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:90628025\|90815845
ORF Type	ORF1
Protein Length	111
Nucleotide Length	333
Protein Sequence	MPNSPSADWPLQGVEENGGIDSLPFRLMLQDCTAVKTLLLKMKRVLQESADMSPASSTTSLPVSPLTEEPVPFKNIQHYINCTHIWSDTCHCIIIEEPKDNQFCIGYNER*
Nucleotide Sequence	ATGCCCAACAGTCCATCTGCGGATTGGCCTCTACAAGGTGTGGAAGAAAACGGAGGCATAGATTCTCTGCCATTCAGACTGATGTTACAGGACTGCACGGCAGTCAAGACGTTATTATTAAAGATGAAGAGAGTTCTTCAAGAGAGTGCAGACATGAGTCCAGCAAGCAGTACCACGTCACTTCCTGTTAGTCCTCTTACTGAAGAGCCAGTGCCTTTCAAGAATATTCAGCATTATATCAACTGTACACACATATGGTCTGACACATGCCACTGCATCATTATAGAAGAGCCAAAGGATAACCAATTTTGCATAGGATATAATGAAAGATGA

CircID	chr4:90628025\|90815845
ORF Type	ORF2
Protein Length	67
Nucleotide Length	201
Protein Sequence	MSSSFSFSCSLSIEHSSFIISYAKLVILWLFYNDAVACVRPYVCTVDIMLNILERHWLFSKRTNRK*
Nucleotide Sequence	ATGAGTTCATCCTTCTCTTTCAGCTGCAGCTTGAGCATCGAGCATTCATCTTTCATTATATCCTATGCAAAATTGGTTATCCTTTGGCTCTTCTATAATGATGCAGTGGCATGTGTCAGACCATATGTGTGTACAGTTGATATAATGCTGAATATTCTTGAAAGGCACTGGCTCTTCAGTAAGAGGACTAACAGGAAGTGA

CircID	chr4:90628025\|90815845
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MPPFSSTPCRGQSADGLLGIRLMWEHLAS*
Nucleotide Sequence	ATGCCTCCGTTTTCTTCCACACCTTGTAGAGGCCAATCCGCAGATGGACTGTTGGGCATTCGGCTGATGTGGGAACACCTGGCTTCTTGA

CircID	chr4:90628025\|90815845
ORF Type	ORF4
Protein Length	70
Nucleotide Length	210
Protein Sequence	VFPHQPNAQQSICGLASTRCGRKRRHRFSAIQTDVTGLHGSQDVIIKDEESSSRECRHESSKQYHVTSC*
Nucleotide Sequence	GTGTTCCCACATCAGCCGAATGCCCAACAGTCCATCTGCGGATTGGCCTCTACAAGGTGTGGAAGAAAACGGAGGCATAGATTCTCTGCCATTCAGACTGATGTTACAGGACTGCACGGCAGTCAAGACGTTATTATTAAAGATGAAGAGAGTTCTTCAAGAGAGTGCAGACATGAGTCCAGCAAGCAGTACCACGTCACTTCCTGTTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:90628025\|90815845	FUS	1	2	0
chr4:90628025\|90815845	CSTF2T	0	0	1
chr4:90628025\|90815845	DDX54	0	0	3
chr4:90628025\|90815845	TAF15	1	0	0
chr4:90628025\|90815845	EIF4A3	0	1	5
chr4:90628025\|90815845	FBL	0	0	1

CircRNA Information