CircRNA Information

General Information
circRNA Basic Information
CircID chr4:9645736|9645866
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CACGCTCACCCCAAATCCTCCTCCCCAGAGTTCTCCTCATTGCTCACCCACTGAACCCAGAACAAACCAGAAGTGCTTGAAATGAGGACGGGTAGCTCCATGTACCAATCGGAATTTAAAACTGTCAATTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:9645736|9645866 hsa-miR-99a-5p 0 0 1
chr4:9645736|9645866 hsa-miR-99a-3p 0 0 1
chr4:9645736|9645866 hsa-miR-100-5p 0 0 1
chr4:9645736|9645866 hsa-miR-100-3p 0 0 1
chr4:9645736|9645866 hsa-miR-146a-5p 0 0 1
chr4:9645736|9645866 hsa-miR-146a-3p 0 0 1
chr4:9645736|9645866 hsa-miR-99b-5p 0 0 1
chr4:9645736|9645866 hsa-miR-99b-3p 0 0 1
chr4:9645736|9645866 hsa-miR-375-5p 0 0 1
chr4:9645736|9645866 hsa-miR-375-3p 0 0 1
chr4:9645736|9645866 hsa-miR-326 0 0 1
chr4:9645736|9645866 hsa-miR-498-5p 0 0 1
chr4:9645736|9645866 hsa-miR-498-3p 0 0 1
chr4:9645736|9645866 hsa-miR-608 0 0 1
chr4:9645736|9645866 hsa-miR-637 0 0 1
chr4:9645736|9645866 hsa-miR-765 0 0 1
chr4:9645736|9645866 hsa-miR-939-5p 0 0 1
chr4:9645736|9645866 hsa-miR-939-3p 0 0 1
chr4:9645736|9645866 hsa-miR-1247-5p 0 0 1
chr4:9645736|9645866 hsa-miR-1247-3p 0 0 1
chr4:9645736|9645866 hsa-miR-1262 0 0 1
chr4:9645736|9645866 hsa-miR-1263 0 0 1
chr4:9645736|9645866 hsa-miR-509-3p 0 1 1
chr4:9645736|9645866 hsa-miR-342-5p 0 0 1
chr4:9645736|9645866 hsa-miR-330-5p 0 0 1
chr4:9645736|9645866 hsa-miR-146b-5p 0 0 1
chr4:9645736|9645866 hsa-miR-3138 1 0 0
chr4:9645736|9645866 hsa-miR-3147 1 0 0
chr4:9645736|9645866 hsa-miR-3908 0 1 0
chr4:9645736|9645866 hsa-miR-4689 1 1 0
chr4:9645736|9645866 hsa-miR-4706 1 0 0
chr4:9645736|9645866 hsa-miR-4739 1 0 0
chr4:9645736|9645866 hsa-miR-4784 0 1 0
chr4:9645736|9645866 hsa-miR-5698 1 0 0
chr4:9645736|9645866 hsa-miR-6133 1 0 0
chr4:9645736|9645866 hsa-miR-6860 1 0 0
chr4:9645736|9645866 hsa-miR-8089 1 1 0
chr4:9645736|9645866 hsa-miR-12118 1 0 0
chr4:9645736|9645866 hsa-miR-29b-1-5p 0 1 0
chr4:9645736|9645866 hsa-miR-6734-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6861-5p 1 0 0
chr4:9645736|9645866 hsa-miR-7106-5p 1 1 0
chr4:9645736|9645866 hsa-miR-6825-5p 1 1 0
chr4:9645736|9645866 hsa-miR-6894-5p 0 1 0
chr4:9645736|9645866 hsa-miR-6880-5p 1 0 0
chr4:9645736|9645866 hsa-miR-7847-3p 1 0 0
chr4:9645736|9645866 hsa-miR-4695-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6759-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6776-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6748-5p 0 1 0
chr4:9645736|9645866 hsa-miR-6793-5p 1 0 0
chr4:9645736|9645866 hsa-miR-23a-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6798-5p 1 0 0
chr4:9645736|9645866 hsa-miR-1224-5p 1 0 0
chr4:9645736|9645866 hsa-miR-1229-5p 1 0 0
chr4:9645736|9645866 hsa-miR-149-3p 1 0 0
chr4:9645736|9645866 hsa-miR-6824-5p 1 0 0
chr4:9645736|9645866 hsa-miR-4664-3p 1 0 0
chr4:9645736|9645866 hsa-miR-514a-5p 0 1 0
chr4:9645736|9645866 hsa-miR-6769b-5p 1 1 0
chr4:9645736|9645866 hsa-miR-6812-5p 1 1 0
chr4:9645736|9645866 hsa-miR-6870-5p 1 0 0
chr4:9645736|9645866 hsa-miR-1343-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6756-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6803-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6819-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6851-5p 1 0 0
chr4:9645736|9645866 hsa-miR-11181-3p 1 1 0
chr4:9645736|9645866 hsa-miR-1249-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6763-5p 1 1 0
chr4:9645736|9645866 hsa-miR-7111-5p 1 0 0
chr4:9645736|9645866 hsa-miR-5196-5p 1 0 0
chr4:9645736|9645866 hsa-miR-328-5p 1 0 0
chr4:9645736|9645866 hsa-miR-4701-3p 0 1 0
chr4:9645736|9645866 hsa-miR-6729-5p 1 0 0
chr4:9645736|9645866 hsa-miR-6794-5p 1 1 0
chr4:9645736|9645866 hsa-miR-6858-5p 1 1 0
chr4:9645736|9645866 hsa-miR-4723-5p 1 0 0
chr4:9645736|9645866 hsa-miR-4633-3p 0 1 0
chr4:9645736|9645866 hsa-miR-4700-5p 1 1 0
chr4:9645736|9645866 hsa-miR-4646-5p 1 0 0
chr4:9645736|9645866 hsa-miR-4667-5p 0 1 0
chr4:9645736|9645866 hsa-miR-6500-5p 0 1 0
chr4:9645736|9645866 hsa-miR-6715b-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr4:9645736|9645866
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MTVLNSDWYMELPVLISSTSGLFWVQWVSNEENSGEEDLG
Nucleotide Sequence TTGACAGTTTTAAATTCCGATTGGTACATGGAGCTACCCGTCCTCATTTCAAGCACTTCTGGTTTGTTCTGGGTTCAGTGGGTGAGCAATGAGGAGAACTCTGGGGAGGAGGATTTGGGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab