CircRNA Information

General Information
circRNA Basic Information
CircID chr5:1160292|1160510
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTGCCTGCTCTCCCACCACCCTTCAGCAGCTCCTCTCCAAAGTCTGCCCCTCCAGGACCCCGTCACGGGGTAGGGGGAGGAGGCGTCCCATCGTCCAACGTACAGTTCAGTAAATGGTGGGGAGAAAGGGTTAACATCCTCTCTCCTGCCCCTTGCCTCCACCCATCTCTGTCTCTCTCTCTCTCTCTCCCTTCCTGTCTCTCTCTGTCTCTCCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:1160292|1160510 hsa-miR-185-5p 0 0 1
chr5:1160292|1160510 hsa-miR-185-3p 0 0 1
chr5:1160292|1160510 hsa-miR-558 0 0 1
chr5:1160292|1160510 hsa-miR-620 0 0 1
chr5:1160292|1160510 hsa-miR-650 0 0 1
chr5:1160292|1160510 hsa-miR-541-5p 0 0 1
chr5:1160292|1160510 hsa-miR-541-3p 0 0 1
chr5:1160292|1160510 hsa-miR-708-5p 0 0 1
chr5:1160292|1160510 hsa-miR-708-3p 0 0 1
chr5:1160292|1160510 hsa-miR-940 1 0 1
chr5:1160292|1160510 hsa-miR-1293 0 0 1
chr5:1160292|1160510 hsa-miR-1265 0 0 1
chr5:1160292|1160510 hsa-miR-1270 0 0 1
chr5:1160292|1160510 hsa-miR-1281 0 0 1
chr5:1160292|1160510 hsa-miR-486-3p 0 0 1
chr5:1160292|1160510 hsa-miR-615-5p 0 0 1
chr5:1160292|1160510 hsa-miR-423-5p 1 0 1
chr5:1160292|1160510 hsa-miR-654-5p 0 0 1
chr5:1160292|1160510 hsa-miR-28-5p 0 0 1
chr5:1160292|1160510 hsa-miR-768-5p 0 0 1
chr5:1160292|1160510 hsa-miR-608 1 0 0
chr5:1160292|1160510 hsa-miR-637 1 0 0
chr5:1160292|1160510 hsa-miR-762 1 0 0
chr5:1160292|1160510 hsa-miR-765 1 0 0
chr5:1160292|1160510 hsa-miR-1183 1 0 0
chr5:1160292|1160510 hsa-miR-1275 1 0 0
chr5:1160292|1160510 hsa-miR-3125 1 0 0
chr5:1160292|1160510 hsa-miR-3132 1 0 0
chr5:1160292|1160510 hsa-miR-3141 1 0 0
chr5:1160292|1160510 hsa-miR-3154 1 0 0
chr5:1160292|1160510 hsa-miR-3175 1 0 0
chr5:1160292|1160510 hsa-miR-3196 1 0 0
chr5:1160292|1160510 hsa-miR-3197 1 0 0
chr5:1160292|1160510 hsa-miR-4298 1 0 0
chr5:1160292|1160510 hsa-miR-4306 1 0 0
chr5:1160292|1160510 hsa-miR-4257 1 0 0
chr5:1160292|1160510 hsa-miR-4259 1 0 0
chr5:1160292|1160510 hsa-miR-4270 1 0 0
chr5:1160292|1160510 hsa-miR-4271 1 0 0
chr5:1160292|1160510 hsa-miR-3652 1 0 0
chr5:1160292|1160510 hsa-miR-4428 1 0 0
chr5:1160292|1160510 hsa-miR-4441 1 0 0
chr5:1160292|1160510 hsa-miR-4462 1 0 0
chr5:1160292|1160510 hsa-miR-4463 1 0 0
chr5:1160292|1160510 hsa-miR-4466 1 0 0
chr5:1160292|1160510 hsa-miR-4476 1 0 0
chr5:1160292|1160510 hsa-miR-4499 1 0 0
chr5:1160292|1160510 hsa-miR-4506 1 0 0
chr5:1160292|1160510 hsa-miR-2392 1 0 0
chr5:1160292|1160510 hsa-miR-4510 1 0 0
chr5:1160292|1160510 hsa-miR-4514 1 0 0
chr5:1160292|1160510 hsa-miR-4516 1 0 0
chr5:1160292|1160510 hsa-miR-3976 1 0 0
chr5:1160292|1160510 hsa-miR-4644 1 0 0
chr5:1160292|1160510 hsa-miR-4651 1 0 0
chr5:1160292|1160510 hsa-miR-4688 1 0 0
chr5:1160292|1160510 hsa-miR-4710 1 0 0
chr5:1160292|1160510 hsa-miR-4739 1 0 0
chr5:1160292|1160510 hsa-miR-5090 1 0 0
chr5:1160292|1160510 hsa-miR-5192 1 0 0
chr5:1160292|1160510 hsa-miR-5194 1 0 0
chr5:1160292|1160510 hsa-miR-5698 1 0 0
chr5:1160292|1160510 hsa-miR-5739 1 0 0
chr5:1160292|1160510 hsa-miR-5787 1 0 0
chr5:1160292|1160510 hsa-miR-6085 1 0 0
chr5:1160292|1160510 hsa-miR-6088 1 0 0
chr5:1160292|1160510 hsa-miR-6090 1 0 0
chr5:1160292|1160510 hsa-miR-6127 1 0 0
chr5:1160292|1160510 hsa-miR-6129 1 0 0
chr5:1160292|1160510 hsa-miR-6130 1 0 0
chr5:1160292|1160510 hsa-miR-6133 1 0 0
chr5:1160292|1160510 hsa-miR-6745 1 0 0
chr5:1160292|1160510 hsa-miR-7150 1 0 0
chr5:1160292|1160510 hsa-miR-8085 1 0 0
chr5:1160292|1160510 hsa-miR-9718 1 0 0
chr5:1160292|1160510 hsa-miR-12114 1 0 0
chr5:1160292|1160510 hsa-miR-12115 1 0 0
chr5:1160292|1160510 hsa-miR-12128 1 0 0
chr5:1160292|1160510 hsa-miR-211-3p 1 0 0
chr5:1160292|1160510 hsa-miR-4433b-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6734-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4700-3p 1 0 0
chr5:1160292|1160510 hsa-miR-4433a-3p 1 0 0
chr5:1160292|1160510 hsa-miR-3150a-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6825-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6894-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6510-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6728-5p 1 0 0
chr5:1160292|1160510 hsa-miR-8071 1 0 0
chr5:1160292|1160510 hsa-miR-1236-5p 1 0 0
chr5:1160292|1160510 hsa-miR-7114-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6089 1 0 0
chr5:1160292|1160510 hsa-miR-6757-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6873-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6880-5p 1 0 0
chr5:1160292|1160510 hsa-miR-7847-3p 1 0 0
chr5:1160292|1160510 hsa-miR-4695-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4653-3p 1 0 0
chr5:1160292|1160510 hsa-miR-4709-3p 1 0 0
chr5:1160292|1160510 hsa-miR-505-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6820-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6741-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6727-5p 1 0 0
chr5:1160292|1160510 hsa-miR-197-5p 1 0 0
chr5:1160292|1160510 hsa-miR-8069 1 0 0
chr5:1160292|1160510 hsa-miR-7845-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6716-5p 1 0 0
chr5:1160292|1160510 hsa-miR-3180-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6748-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6772-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6796-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6732-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6805-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6827-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6798-5p 1 0 0
chr5:1160292|1160510 hsa-miR-3126-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6760-5p 1 0 0
chr5:1160292|1160510 hsa-miR-2467-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6782-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6786-5p 1 0 0
chr5:1160292|1160510 hsa-miR-7109-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1226-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1229-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4640-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1908-5p 1 0 0
chr5:1160292|1160510 hsa-miR-296-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6771-5p 1 0 0
chr5:1160292|1160510 hsa-miR-3202 1 0 0
chr5:1160292|1160510 hsa-miR-6834-5p 1 0 0
chr5:1160292|1160510 hsa-miR-149-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6824-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6878-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6892-5p 1 0 0
chr5:1160292|1160510 hsa-miR-873-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6832-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6801-5p 1 0 0
chr5:1160292|1160510 hsa-miR-7113-5p 1 0 0
chr5:1160292|1160510 hsa-miR-483-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6761-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6857-3p 1 0 0
chr5:1160292|1160510 hsa-miR-4520-3p 1 0 0
chr5:1160292|1160510 hsa-miR-1207-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1233-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4763-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6769b-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6778-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6816-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6870-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6893-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1343-5p 1 0 0
chr5:1160292|1160510 hsa-miR-3180 1 0 0
chr5:1160292|1160510 hsa-miR-6726-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6743-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6754-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6756-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6769a-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6819-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1249-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6722-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6763-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6779-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6780a-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6797-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6808-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6875-5p 1 0 0
chr5:1160292|1160510 hsa-miR-7111-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4728-5p 1 0 0
chr5:1160292|1160510 hsa-miR-5196-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6780b-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6862-5p 1 0 0
chr5:1160292|1160510 hsa-miR-10396b-5p 1 0 0
chr5:1160292|1160510 hsa-miR-10526-3p 1 0 0
chr5:1160292|1160510 hsa-miR-1909-3p 1 0 0
chr5:1160292|1160510 hsa-miR-328-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4725-3p 1 0 0
chr5:1160292|1160510 hsa-miR-4726-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6738-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6794-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6795-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6846-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6858-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6883-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6887-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4723-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6831-5p 1 0 0
chr5:1160292|1160510 hsa-miR-939-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1910-3p 1 0 0
chr5:1160292|1160510 hsa-miR-365b-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6511a-5p 1 0 0
chr5:1160292|1160510 hsa-miR-30c-1-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6731-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6758-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6856-5p 1 0 0
chr5:1160292|1160510 hsa-miR-1914-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6736-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6876-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6891-5p 1 0 0
chr5:1160292|1160510 hsa-miR-4716-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6766-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6785-5p 1 0 0
chr5:1160292|1160510 hsa-miR-3184-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6791-5p 1 0 0
chr5:1160292|1160510 hsa-miR-3529-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6884-5p 1 0 0
chr5:1160292|1160510 hsa-miR-6737-3p 1 0 0
chr5:1160292|1160510 hsa-miR-6733-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:1160292|1160510
ORF Type ORF1
Protein Length 72
Nucleotide Length 216
Protein Sequence LPALPPPFSSSSPKSAPPGPRHGVGGGGVPSSNVQFSKWWGERVNILSPAPCLHPSLSLSLSLPSCLSLSLP
Nucleotide Sequence CTGCCTGCTCTCCCACCACCCTTCAGCAGCTCCTCTCCAAAGTCTGCCCCTCCAGGACCCCGTCACGGGGTAGGGGGAGGAGGCGTCCCATCGTCCAACGTACAGTTCAGTAAATGGTGGGGAGAAAGGGTTAACATCCTCTCTCCTGCCCCTTGCCTCCACCCATCTCTGTCTCTCTCTCTCTCTCTCCCTTCCTGTCTCTCTCTGTCTCTCCCT
CircID chr5:1160292|1160510
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MYVGRWDASSPYPVTGSWRGRLWRGAAEGWWESRQ
Nucleotide Sequence CTGTACGTTGGACGATGGGACGCCTCCTCCCCCTACCCCGTGACGGGGTCCTGGAGGGGCAGACTTTGGAGAGGAGCTGCTGAAGGGTGGTGGGAGAGCAGGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab