CircRNA Information

General Information
circRNA Basic Information
CircID chr5:132758639|132758788
Strand +
CircType exon
Host Gene ENSG00000164402.12;
Algorism CIRI2;
Sequence TTTAGACTTTCATGTGTTAAGTTGCTTGAGTTACACCTTGTGACCCTTCTCCCATAACATGGTGTGAGGACGGACTGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTGCTTTCCTCCCACCGACCCTGGCCCCAGGCTGCCCCGGGC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:132758639|132758788 hsa-miR-30a-5p 0 0 1
chr5:132758639|132758788 hsa-miR-30a-3p 0 0 1
chr5:132758639|132758788 hsa-miR-30d-5p 0 0 1
chr5:132758639|132758788 hsa-miR-30d-3p 0 0 1
chr5:132758639|132758788 hsa-miR-30b-5p 0 0 1
chr5:132758639|132758788 hsa-miR-30b-3p 0 0 1
chr5:132758639|132758788 hsa-miR-141-5p 0 0 1
chr5:132758639|132758788 hsa-miR-141-3p 0 0 1
chr5:132758639|132758788 hsa-miR-200a-5p 0 0 1
chr5:132758639|132758788 hsa-miR-200a-3p 0 0 1
chr5:132758639|132758788 hsa-miR-30e-5p 0 0 1
chr5:132758639|132758788 hsa-miR-30e-3p 0 0 1
chr5:132758639|132758788 hsa-miR-624-5p 0 0 1
chr5:132758639|132758788 hsa-miR-624-3p 0 0 1
chr5:132758639|132758788 hsa-miR-661 0 1 1
chr5:132758639|132758788 hsa-miR-891b 0 0 1
chr5:132758639|132758788 hsa-miR-1228-5p 0 0 1
chr5:132758639|132758788 hsa-miR-1228-3p 0 0 1
chr5:132758639|132758788 hsa-miR-513b-5p 0 0 1
chr5:132758639|132758788 hsa-miR-513b-3p 0 0 1
chr5:132758639|132758788 hsa-miR-486-3p 0 1 1
chr5:132758639|132758788 hsa-miR-1289 0 0 1
chr5:132758639|132758788 hsa-miR-342-3p 0 0 1
chr5:132758639|132758788 hsa-miR-886-5p 0 0 1
chr5:132758639|132758788 hsa-miR-30c 0 0 1
chr5:132758639|132758788 hsa-miR-220a 0 0 1
chr5:132758639|132758788 hsa-miR-608 1 0 0
chr5:132758639|132758788 hsa-miR-762 1 0 0
chr5:132758639|132758788 hsa-miR-1182 1 0 0
chr5:132758639|132758788 hsa-miR-2861 1 0 0
chr5:132758639|132758788 hsa-miR-3196 1 0 0
chr5:132758639|132758788 hsa-miR-3916 1 0 0
chr5:132758639|132758788 hsa-miR-4429 1 0 0
chr5:132758639|132758788 hsa-miR-4457 0 1 0
chr5:132758639|132758788 hsa-miR-4497 1 0 0
chr5:132758639|132758788 hsa-miR-4507 1 0 0
chr5:132758639|132758788 hsa-miR-4516 1 1 0
chr5:132758639|132758788 hsa-miR-4651 1 0 0
chr5:132758639|132758788 hsa-miR-4688 1 0 0
chr5:132758639|132758788 hsa-miR-4710 1 0 0
chr5:132758639|132758788 hsa-miR-4739 1 0 0
chr5:132758639|132758788 hsa-miR-4741 1 0 0
chr5:132758639|132758788 hsa-miR-5090 1 1 0
chr5:132758639|132758788 hsa-miR-5787 1 0 0
chr5:132758639|132758788 hsa-miR-6132 1 0 0
chr5:132758639|132758788 hsa-miR-6133 1 0 0
chr5:132758639|132758788 hsa-miR-8089 1 0 0
chr5:132758639|132758788 hsa-miR-128-1-5p 1 0 0
chr5:132758639|132758788 hsa-miR-149-5p 0 1 0
chr5:132758639|132758788 hsa-miR-7106-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6894-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4687-3p 1 0 0
chr5:132758639|132758788 hsa-miR-6799-5p 1 0 0
chr5:132758639|132758788 hsa-miR-1227-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6089 1 0 0
chr5:132758639|132758788 hsa-miR-3192-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6746-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4755-3p 1 0 0
chr5:132758639|132758788 hsa-miR-6727-5p 1 0 0
chr5:132758639|132758788 hsa-miR-3151-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6748-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6770-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6782-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6810-5p 1 0 0
chr5:132758639|132758788 hsa-miR-5006-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6786-5p 1 1 0
chr5:132758639|132758788 hsa-miR-7109-5p 1 0 0
chr5:132758639|132758788 hsa-miR-185-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6784-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4640-5p 1 1 0
chr5:132758639|132758788 hsa-miR-30c-2-3p 1 1 0
chr5:132758639|132758788 hsa-miR-296-3p 1 0 0
chr5:132758639|132758788 hsa-miR-6823-5p 1 1 0
chr5:132758639|132758788 hsa-miR-149-3p 1 1 0
chr5:132758639|132758788 hsa-miR-6824-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6802-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6781-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4708-3p 1 0 0
chr5:132758639|132758788 hsa-miR-653-3p 0 1 0
chr5:132758639|132758788 hsa-miR-1233-5p 1 1 0
chr5:132758639|132758788 hsa-miR-1273h-5p 1 1 0
chr5:132758639|132758788 hsa-miR-4763-3p 1 0 0
chr5:132758639|132758788 hsa-miR-6769b-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6778-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6787-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6812-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6775-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6769a-5p 1 0 0
chr5:132758639|132758788 hsa-miR-7107-5p 1 0 0
chr5:132758639|132758788 hsa-miR-1249-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6722-3p 1 0 0
chr5:132758639|132758788 hsa-miR-6779-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6780a-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6788-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6797-5p 1 1 0
chr5:132758639|132758788 hsa-miR-7111-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4728-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6836-5p 1 0 0
chr5:132758639|132758788 hsa-miR-1237-5p 1 0 0
chr5:132758639|132758788 hsa-miR-328-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4632-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4649-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4685-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4726-5p 1 1 0
chr5:132758639|132758788 hsa-miR-6729-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6795-5p 1 0 0
chr5:132758639|132758788 hsa-miR-30c-1-3p 1 1 0
chr5:132758639|132758788 hsa-miR-6731-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4665-5p 1 0 0
chr5:132758639|132758788 hsa-miR-4716-3p 1 0 0
chr5:132758639|132758788 hsa-miR-10398-5p 0 1 0
chr5:132758639|132758788 hsa-miR-6791-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6762-5p 1 0 0
chr5:132758639|132758788 hsa-miR-6764-5p 1 0 0
chr5:132758639|132758788 hsa-miR-505-3p 1 0 0
chr5:132758639|132758788 hsa-miR-6835-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:132758639|132758788
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MGAGTDSSVYSLAFLPPTLAPGCPG
Nucleotide Sequence CTGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTGCTTTCCTCCCACCGACCCTGGCCCCAGGCTGCCCCGGG
CircID chr5:132758639|132758788
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MGPGSVGGKQGCKHWSLYRLPVRPHTMLWEKGHKV
Nucleotide Sequence CTGGGGCCAGGGTCGGTGGGAGGAAAGCAAGGCTGTAAACACTGGAGTCTGTACCGGCTCCCAGTCCGTCCTCACACCATGTTATGGGAGAAGGGTCACAAGGTGTAA
CircID chr5:132758639|132758788
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MESVPAPSPSSHHVMGEGSQGVTQAT
Nucleotide Sequence CTGGAGTCTGTACCGGCTCCCAGTCCGTCCTCACACCATGTTATGGGAGAAGGGTCACAAGGTGTAACTCAAGCAACTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab