CircNet

General Information

circRNA Basic Information

CircID	chr5:132883340\|132885119
Strand	-
CircType	exon
Host Gene	ENSG00000072364.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	AATTCTTATAATAATTCTCAAGCACCATCGCCTGGCTTGGGAAGTGTGTGATCATAGTCTTGAACATTTCACAAATTTTAATACTCCTGAAATGAACCTGCCAGATTTCAACATTTTTTTAGGTTAAATGTGAATTCCACCAAACTTTCTACAAAACAGTATAAAAAATATGTAATTATATGCCCGAACAGATGGAAAGTGTTGAGCAGAGAGTGAGGGGATCTGGCTTTTAAGTCTTTGAACTGTAACAAGCAAAGCTGTGGGGATGCCTTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCAGGAAATTATTCATCTGGGGCCAGTAGTGCTTCTGCAAGTGGTTCTTCAGTGACCATTCCACAGAAGATCCACCAGATGGCAGCCAGCTATGTTCAGGTCACATCCAACTTCCTCTATGCCACCGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAGCAAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:132883340\|132885119	hsa-miR-320a-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-320a-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-520f-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-520f-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-591	0	0	1
chr5:132883340\|132885119	hsa-miR-637	1	0	1
chr5:132883340\|132885119	hsa-miR-873-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-873-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-944	0	0	1
chr5:132883340\|132885119	hsa-miR-1226-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-1226-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-1276	0	0	1
chr5:132883340\|132885119	hsa-miR-548p	0	0	1
chr5:132883340\|132885119	hsa-miR-513c-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-513c-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-22-5p	0	1	1
chr5:132883340\|132885119	hsa-miR-140-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-203a-5p	0	1	1
chr5:132883340\|132885119	hsa-miR-181c-3p	0	1	1
chr5:132883340\|132885119	hsa-miR-512-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-491-5p	0	1	1
chr5:132883340\|132885119	hsa-miR-885-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-330-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-532-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-331-3p	0	0	1
chr5:132883340\|132885119	hsa-miR-199b-3p	0	1	1
chr5:132883340\|132885119	hsa-miR-199a-3p	0	1	1
chr5:132883340\|132885119	hsa-miR-320b	0	0	1
chr5:132883340\|132885119	hsa-miR-320c	0	0	1
chr5:132883340\|132885119	hsa-miR-1302	0	0	1
chr5:132883340\|132885119	hsa-miR-320d	0	0	1
chr5:132883340\|132885119	hsa-miR-515-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-371-5p	0	0	1
chr5:132883340\|132885119	hsa-miR-1274b	0	0	1
chr5:132883340\|132885119	hsa-miR-664	0	0	1
chr5:132883340\|132885119	hsa-miR-544	0	0	1
chr5:132883340\|132885119	hsa-miR-3122	0	1	0
chr5:132883340\|132885119	hsa-miR-4489	1	0	0
chr5:132883340\|132885119	hsa-miR-6084	1	1	0
chr5:132883340\|132885119	hsa-miR-128-1-5p	1	0	0
chr5:132883340\|132885119	hsa-miR-1227-5p	1	1	0
chr5:132883340\|132885119	hsa-miR-4640-5p	1	1	0
chr5:132883340\|132885119	hsa-miR-4715-3p	0	1	0
chr5:132883340\|132885119	hsa-miR-2276-3p	0	1	0
chr5:132883340\|132885119	hsa-miR-4742-5p	0	1	0
chr5:132883340\|132885119	hsa-miR-1911-3p	0	1	0
chr5:132883340\|132885119	hsa-miR-4661-3p	0	1	0
chr5:132883340\|132885119	hsa-miR-493-3p	0	1	0
chr5:132883340\|132885119	hsa-miR-6734-3p	0	1	0
chr5:132883340\|132885119	hsa-miR-4726-5p	1	1	0
chr5:132883340\|132885119	hsa-miR-6762-5p	1	1	0
chr5:132883340\|132885119	hsa-miR-3059-5p	0	1	0
chr5:132883340\|132885119	hsa-miR-3619-5p	1	0	0
chr5:132883340\|132885119	hsa-miR-370-5p	0	1	0
chr5:132883340\|132885119	hsa-miR-3129-5p	0	1	0
chr5:132883340\|132885119	hsa-miR-4645-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:132883340\|132885119
ORF Type	ORF1
Protein Length	71
Nucleotide Length	213
Protein Sequence	MNNFLNCLVTALEKQGKASPQLCLLQFKDLKARSPHSLLNTFHLFGHIITYFLYCFVESLVEFTFNLKKC*
Nucleotide Sequence	ATGAATAATTTCCTGAATTGCCTGGTGACAGCTTTGGAGAAACAGGGGAAGGCATCCCCACAGCTTTGCTTGTTACAGTTCAAAGACTTAAAAGCCAGATCCCCTCACTCTCTGCTCAACACTTTCCATCTGTTCGGGCATATAATTACATATTTTTTATACTGTTTTGTAGAAAGTTTGGTGGAATTCACATTTAACCTAAAAAAATGTTGA

CircID	chr5:132883340\|132885119
ORF Type	ORF2
Protein Length	69
Nucleotide Length	207
Protein Sequence	MPSPVSPKLSPGNSGNYSSGASSASASGSSVTIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQK
Nucleotide Sequence	ATGCCTTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCAGGAAATTATTCATCTGGGGCCAGTAGTGCTTCTGCAAGTGGTTCTTCAGTGACCATTCCACAGAAGATCCACCAGATGGCAGCCAGCTATGTTCAGGTCACATCCAACTTCCTCTATGCCACCGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAGCAAAAA

CircID	chr5:132883340\|132885119
ORF Type	ORF3
Protein Length	60
Nucleotide Length	180
Protein Sequence	LPGDSFGETGEGIPTALLVTVQRLKSQIPSLSAQHFPSVRAYNYIFFILFCRKFGGIHI*
Nucleotide Sequence	TTGCCTGGTGACAGCTTTGGAGAAACAGGGGAAGGCATCCCCACAGCTTTGCTTGTTACAGTTCAAAGACTTAAAAGCCAGATCCCCTCACTCTCTGCTCAACACTTTCCATCTGTTCGGGCATATAATTACATATTTTTTATACTGTTTTGTAGAAAGTTTGGTGGAATTCACATTTAA

CircID	chr5:132883340\|132885119
ORF Type	ORF1
Protein Length	45
Nucleotide Length	138
Protein Sequence	MPSGGSSVEWSLKNHLQKHYWPQMNNFLNCLVTALEKQGKASPQL
Nucleotide Sequence	CTGCCATCTGGTGGATCTTCTGTGGAATGGTCACTGAAGAACCACTTGCAGAAGCACTACTGGCCCCAGATGAATAATTTCCTGAATTGCCTGGTGACAGCTTTGGAGAAACAGGGGAAGGCATCCCCACAGCTTTGA

CircID	chr5:132883340\|132885119
ORF Type	ORF2
Protein Length	38
Nucleotide Length	117
Protein Sequence	MLFGKLFSLVPNFGGIEEVGCDLNIAGCHLVDLLWNGH
Nucleotide Sequence	TTGCTCTTTGGAAAGCTGTTCAGCTTGGTCCCAAATTTCGGTGGCATAGAGGAAGTTGGATGTGACCTGAACATAGCTGGCTGCCATCTGGTGGATCTTCTGTGGAATGGTCACTGA

CircID	chr5:132883340\|132885119
ORF Type	ORF3
Protein Length	26
Nucleotide Length	81
Protein Sequence	MAAIWWIFCGMVTEEPLAEALLAPDE
Nucleotide Sequence	CTGGCTGCCATCTGGTGGATCTTCTGTGGAATGGTCACTGAAGAACCACTTGCAGAAGCACTACTGGCCCCAGATGAATAA

CircID	chr5:132883340\|132885119
ORF Type	ORF4
Protein Length	69
Nucleotide Length	207
Protein Sequence	MPSPVSPKLSPGNSGNYSSGASSASASGSSVTIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQK
Nucleotide Sequence	ATGCCTTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCAGGAAATTATTCATCTGGGGCCAGTAGTGCTTCTGCAAGTGGTTCTTCAGTGACCATTCCACAGAAGATCCACCAGATGGCAGCCAGCTATGTTCAGGTCACATCCAACTTCCTCTATGCCACCGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAGCAAAAA

CircID	chr5:132883340\|132885119
ORF Type	ORF5
Protein Length	33
Nucleotide Length	102
Protein Sequence	MWGCLPLFLQSCHQAIQEIIHLGPVVLLQVVLQ
Nucleotide Sequence	CTGTGGGGATGCCTTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCAGGAAATTATTCATCTGGGGCCAGTAGTGCTTCTGCAAGTGGTTCTTCAGTGA

CircID	chr5:132883340\|132885119
ORF Type	ORF6
Protein Length	26
Nucleotide Length	78
Protein Sequence	MFRSHPTSSMPPKFGTKLNSFPKSKK
Nucleotide Sequence	ATGTTCAGGTCACATCCAACTTCCTCTATGCCACCGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAGCAAAAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:132883340\|132885119	KHSRP	1	0	0
chr5:132883340\|132885119	ELAVL1	4	4	1
chr5:132883340\|132885119	SF3B4	1	0	0
chr5:132883340\|132885119	SF3B1	1	0	0
chr5:132883340\|132885119	AARS	0	1	0
chr5:132883340\|132885119	PRPF8	1	1	0
chr5:132883340\|132885119	RPS3	0	3	0
chr5:132883340\|132885119	ZNF622	0	1	0
chr5:132883340\|132885119	TAF15	0	1	0
chr5:132883340\|132885119	FMR1	0	0	5
chr5:132883340\|132885119	NUDT21	0	1	0
chr5:132883340\|132885119	GEMIN5	0	1	0
chr5:132883340\|132885119	FUS	1	2	0
chr5:132883340\|132885119	GNL3	1	0	0
chr5:132883340\|132885119	SRSF1	1	0	0
chr5:132883340\|132885119	NOP58	5	3	4
chr5:132883340\|132885119	SRSF3	1	0	0
chr5:132883340\|132885119	U2AF1	3	0	3
chr5:132883340\|132885119	U2AF2	15	3	5
chr5:132883340\|132885119	SRSF9	0	0	1
chr5:132883340\|132885119	NOP56	0	3	0
chr5:132883340\|132885119	DDX54	1	1	9
chr5:132883340\|132885119	LSM11	1	0	0
chr5:132883340\|132885119	RBM10	2	1	0
chr5:132883340\|132885119	HNRNPL	3	0	0
chr5:132883340\|132885119	HNRNPM	0	0	3
chr5:132883340\|132885119	FIP1L1	1	0	1
chr5:132883340\|132885119	PTBP1	1	0	1
chr5:132883340\|132885119	HNRNPC	8	1	0
chr5:132883340\|132885119	TRA2A	0	2	3
chr5:132883340\|132885119	DDX3X	0	13	0
chr5:132883340\|132885119	AUH	1	0	0
chr5:132883340\|132885119	HNRNPA1	0	1	0
chr5:132883340\|132885119	PCBP2	1	0	0
chr5:132883340\|132885119	SND1	0	1	0
chr5:132883340\|132885119	IGF2BP1	0	0	1
chr5:132883340\|132885119	GTF2F1	1	0	0
chr5:132883340\|132885119	IGF2BP3	0	0	4
chr5:132883340\|132885119	IGF2BP2	4	3	5
chr5:132883340\|132885119	TARDBP	0	3	0
chr5:132883340\|132885119	BUD13	1	1	2
chr5:132883340\|132885119	RBFOX2	1	0	0
chr5:132883340\|132885119	RBM47	2	0	2
chr5:132883340\|132885119	EIF4G2	0	0	1
chr5:132883340\|132885119	DDX42	1	0	0
chr5:132883340\|132885119	CSTF2T	0	1	3
chr5:132883340\|132885119	CSTF2	3	0	0
chr5:132883340\|132885119	DKC1	1	0	0
chr5:132883340\|132885119	HNRNPK	7	0	0
chr5:132883340\|132885119	FBL	0	0	2
chr5:132883340\|132885119	ATXN2	0	1	0
chr5:132883340\|132885119	EIF4A3	3	2	5
chr5:132883340\|132885119	AGO2	0	0	2

CircRNA Information