CircRNA Information

General Information
circRNA Basic Information
CircID chr5:133105788|133105940
Strand +
CircType exon
Host Gene ENSG00000170606.12;
Algorism CIRI2;
Sequence CTGGCCTTGTTGTGGTGCCTCGAGGCCTCCATGCATGCTTACACACCAACATAAGTATACTTTCCCCTTCCTCCTCCTAAGCAATTGTTCTCCATTGCACTTTAGAGCCTGTAACACTCAAACTTTTCAATGTTATCTAGAGATGGACAAACG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:133105788|133105940 hsa-miR-17-5p 0 0 1
chr5:133105788|133105940 hsa-miR-17-3p 0 0 1
chr5:133105788|133105940 hsa-miR-20a-5p 0 0 1
chr5:133105788|133105940 hsa-miR-20a-3p 0 0 1
chr5:133105788|133105940 hsa-miR-93-5p 0 0 1
chr5:133105788|133105940 hsa-miR-93-3p 0 0 1
chr5:133105788|133105940 hsa-miR-106a-5p 0 0 1
chr5:133105788|133105940 hsa-miR-106a-3p 0 0 1
chr5:133105788|133105940 hsa-miR-130a-5p 0 0 1
chr5:133105788|133105940 hsa-miR-130a-3p 0 0 1
chr5:133105788|133105940 hsa-miR-106b-5p 0 0 1
chr5:133105788|133105940 hsa-miR-106b-3p 0 0 1
chr5:133105788|133105940 hsa-miR-301a-5p 0 0 1
chr5:133105788|133105940 hsa-miR-301a-3p 0 0 1
chr5:133105788|133105940 hsa-miR-130b-5p 0 0 1
chr5:133105788|133105940 hsa-miR-130b-3p 0 0 1
chr5:133105788|133105940 hsa-miR-20b-5p 0 0 1
chr5:133105788|133105940 hsa-miR-20b-3p 0 0 1
chr5:133105788|133105940 hsa-miR-484 0 0 1
chr5:133105788|133105940 hsa-miR-519d-5p 0 0 1
chr5:133105788|133105940 hsa-miR-519d-3p 0 0 1
chr5:133105788|133105940 hsa-miR-561-5p 0 0 1
chr5:133105788|133105940 hsa-miR-561-3p 0 0 1
chr5:133105788|133105940 hsa-miR-577 0 0 1
chr5:133105788|133105940 hsa-miR-650 0 0 1
chr5:133105788|133105940 hsa-miR-454-5p 0 0 1
chr5:133105788|133105940 hsa-miR-454-3p 0 0 1
chr5:133105788|133105940 hsa-miR-765 1 1 1
chr5:133105788|133105940 hsa-miR-543 0 0 1
chr5:133105788|133105940 hsa-miR-301b-5p 0 0 1
chr5:133105788|133105940 hsa-miR-301b-3p 0 0 1
chr5:133105788|133105940 hsa-miR-548l 0 0 1
chr5:133105788|133105940 hsa-miR-1251-5p 0 0 1
chr5:133105788|133105940 hsa-miR-1251-3p 0 0 1
chr5:133105788|133105940 hsa-miR-302f 0 0 1
chr5:133105788|133105940 hsa-miR-574-5p 0 0 1
chr5:133105788|133105940 hsa-miR-519b-3p 0 0 1
chr5:133105788|133105940 hsa-miR-519c-3p 0 0 1
chr5:133105788|133105940 hsa-miR-519a 0 0 1
chr5:133105788|133105940 hsa-miR-637 1 0 0
chr5:133105788|133105940 hsa-miR-658 1 0 0
chr5:133105788|133105940 hsa-miR-3125 1 0 0
chr5:133105788|133105940 hsa-miR-3154 1 0 0
chr5:133105788|133105940 hsa-miR-3155a 1 1 0
chr5:133105788|133105940 hsa-miR-3155b 1 1 0
chr5:133105788|133105940 hsa-miR-2392 1 0 0
chr5:133105788|133105940 hsa-miR-4510 1 0 0
chr5:133105788|133105940 hsa-miR-4516 1 0 0
chr5:133105788|133105940 hsa-miR-4525 1 0 0
chr5:133105788|133105940 hsa-miR-4739 1 0 0
chr5:133105788|133105940 hsa-miR-5706 0 1 0
chr5:133105788|133105940 hsa-miR-6127 1 0 0
chr5:133105788|133105940 hsa-miR-6130 1 0 0
chr5:133105788|133105940 hsa-miR-6133 1 0 0
chr5:133105788|133105940 hsa-miR-6165 1 0 0
chr5:133105788|133105940 hsa-miR-1843 0 1 0
chr5:133105788|133105940 hsa-miR-12118 1 0 0
chr5:133105788|133105940 hsa-miR-4433b-3p 1 0 0
chr5:133105788|133105940 hsa-miR-6734-5p 1 0 0
chr5:133105788|133105940 hsa-miR-7106-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6825-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6894-5p 1 0 0
chr5:133105788|133105940 hsa-miR-766-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6089 1 0 0
chr5:133105788|133105940 hsa-miR-6880-5p 1 0 0
chr5:133105788|133105940 hsa-miR-7847-3p 1 0 0
chr5:133105788|133105940 hsa-miR-4695-5p 1 0 0
chr5:133105788|133105940 hsa-miR-7154-3p 1 0 0
chr5:133105788|133105940 hsa-miR-593-5p 0 1 0
chr5:133105788|133105940 hsa-miR-6806-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6721-5p 1 0 0
chr5:133105788|133105940 hsa-miR-3190-3p 1 0 0
chr5:133105788|133105940 hsa-miR-6805-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6798-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6760-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6821-5p 1 1 0
chr5:133105788|133105940 hsa-miR-30b-3p 1 0 0
chr5:133105788|133105940 hsa-miR-5008-5p 1 0 0
chr5:133105788|133105940 hsa-miR-4732-5p 1 0 0
chr5:133105788|133105940 hsa-miR-3202 1 1 0
chr5:133105788|133105940 hsa-miR-149-3p 1 0 0
chr5:133105788|133105940 hsa-miR-4802-5p 0 1 0
chr5:133105788|133105940 hsa-miR-4763-3p 1 0 0
chr5:133105788|133105940 hsa-miR-6778-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6870-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6743-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6754-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6756-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6851-5p 1 0 0
chr5:133105788|133105940 hsa-miR-11181-3p 1 1 0
chr5:133105788|133105940 hsa-miR-1249-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6779-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6780a-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6797-5p 1 0 0
chr5:133105788|133105940 hsa-miR-7111-5p 1 1 0
chr5:133105788|133105940 hsa-miR-4728-5p 1 0 0
chr5:133105788|133105940 hsa-miR-5196-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6780b-5p 1 0 0
chr5:133105788|133105940 hsa-miR-4725-3p 1 0 0
chr5:133105788|133105940 hsa-miR-6794-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6858-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6883-5p 1 0 0
chr5:133105788|133105940 hsa-miR-4769-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6758-5p 1 0 0
chr5:133105788|133105940 hsa-miR-6891-5p 1 0 0
chr5:133105788|133105940 hsa-miR-4716-3p 1 0 0
chr5:133105788|133105940 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:133105788|133105940
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MLTHQHKYTFPFLLLSNCSPLHFRACNTQTFQCYLEMDK
Nucleotide Sequence ATGCTTACACACCAACATAAGTATACTTTCCCCTTCCTCCTCCTAAGCAATTGTTCTCCATTGCACTTTAGAGCCTGTAACACTCAAACTTTTCAATGTTATCTAGAGATGGACAAA
CircID chr5:133105788|133105940
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MLRRRKGKVYLCWCVSMHGGLEAPQQGQ
Nucleotide Sequence TTGCTTAGGAGGAGGAAGGGGAAAGTATACTTATGTTGGTGTGTAAGCATGCATGGAGGCCTCGAGGCACCACAACAAGGCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab