CircNet

General Information

circRNA Basic Information

CircID	chr5:134697899\|134703932
Strand	+
CircType	exon
Host Gene	ENSG00000113615.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTGTATTTCTCGGTATTCAGCAGGTAGTGTCTATTACTATCCCTCTTACCATCATCAGCACAACCCAGTCCAAGTACAGAAATTACAGAAGGAACTACAGAGATACCTTACTCGGAAGATTGGCTTTGAGGCAGTCATGAGGATTCGGTGCACCAAAGGTCTTTCCATTCATACTTTCCATGGAAACTTCTTTGTTAGGTCAACCGACTTACTGTCTTTGCCTAACGTCAACCCAGACGCTGGGTATGCAGTACAGATGTCAGTGGAAGAGAGTCTTACTGACACTCAGTTGGTTTCTTTTCAGTCAGCACTCTTGTATACATCCAGCAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:134697899\|134703932	hsa-miR-9-5p	0	1	1
chr5:134697899\|134703932	hsa-miR-181a-2-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:134697899\|134703932
ORF Type	ORF1
Protein Length	65
Nucleotide Length	195
Protein Sequence	MRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSK
Nucleotide Sequence	ATGAGGATTCGGTGCACCAAAGGTCTTTCCATTCATACTTTCCATGGAAACTTCTTTGTTAGGTCAACCGACTTACTGTCTTTGCCTAACGTCAACCCAGACGCTGGGTATGCAGTACAGATGTCAGTGGAAGAGAGTCTTACTGACACTCAGTTGGTTTCTTTTCAGTCAGCACTCTTGTATACATCCAGCAAA

CircID	chr5:134697899\|134703932
ORF Type	ORF2
Protein Length	51
Nucleotide Length	153
Protein Sequence	METSLLGQPTYCLCLTSTQTLGMQYRCQWKRVLLTLSWFLFSQHSCIHPAK
Nucleotide Sequence	ATGGAAACTTCTTTGTTAGGTCAACCGACTTACTGTCTTTGCCTAACGTCAACCCAGACGCTGGGTATGCAGTACAGATGTCAGTGGAAGAGAGTCTTACTGACACTCAGTTGGTTTCTTTTCAGTCAGCACTCTTGTATACATCCAGCAAAG

CircID	chr5:134697899\|134703932
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MERPLVHRILMTASKPIFRVRYLCSSFCNFCTWTGLC*
Nucleotide Sequence	ATGGAAAGACCTTTGGTGCACCGAATCCTCATGACTGCCTCAAAGCCAATCTTCCGAGTAAGGTATCTCTGTAGTTCCTTCTGTAATTTCTGTACTTGGACTGGGTTGTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:134697899\|134703932	NOP56	1	0	0
chr5:134697899\|134703932	MOV10	5	0	1
chr5:134697899\|134703932	FUS	0	0	1
chr5:134697899\|134703932	NCBP3	1	0	0
chr5:134697899\|134703932	PRPF8	2	0	0
chr5:134697899\|134703932	UPF1	2	0	0
chr5:134697899\|134703932	FMR1	5	0	3
chr5:134697899\|134703932	SRSF7	2	0	0
chr5:134697899\|134703932	SRSF1	4	0	4
chr5:134697899\|134703932	NOP58	1	0	2
chr5:134697899\|134703932	U2AF2	5	0	3
chr5:134697899\|134703932	DDX54	2	0	2
chr5:134697899\|134703932	RBM10	5	0	0
chr5:134697899\|134703932	HNRNPL	0	1	0
chr5:134697899\|134703932	HNRNPA2B1	2	0	0
chr5:134697899\|134703932	SF3A3	1	0	0
chr5:134697899\|134703932	PTBP1	1	0	2
chr5:134697899\|134703932	SMNDC1	1	0	0
chr5:134697899\|134703932	ACIN1	1	1	7
chr5:134697899\|134703932	LIN28B	1	0	1
chr5:134697899\|134703932	FXR1	1	0	3
chr5:134697899\|134703932	FXR2	1	0	1
chr5:134697899\|134703932	SND1	0	1	1
chr5:134697899\|134703932	IGF2BP1	2	0	3
chr5:134697899\|134703932	IGF2BP3	1	0	5
chr5:134697899\|134703932	IGF2BP2	2	1	4
chr5:134697899\|134703932	TARDBP	0	0	1
chr5:134697899\|134703932	KHSRP	0	1	0
chr5:134697899\|134703932	CSTF2T	0	0	1
chr5:134697899\|134703932	TARBP2	1	0	0
chr5:134697899\|134703932	RBM22	1	1	0
chr5:134697899\|134703932	TIAL1	0	1	0
chr5:134697899\|134703932	FBL	0	0	1
chr5:134697899\|134703932	EIF4A3	3	2	4
chr5:134697899\|134703932	AGO2	1	0	4

CircRNA Information