CircRNA Information

General Information
circRNA Basic Information
CircID chr5:136063210|136063431
Strand +
CircType exon
Host Gene ENSG00000120708.15;
Algorism CIRI2;
Sequence AGCCATGTTTAGGGGGAACATGATTTAAAAAGTACATCTCTCTCCCTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTTGAAAACATTCAAACAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCATCCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:136063210|136063431 hsa-miR-143-5p 0 0 1
chr5:136063210|136063431 hsa-miR-143-3p 0 0 1
chr5:136063210|136063431 hsa-miR-185-5p 0 0 1
chr5:136063210|136063431 hsa-miR-185-3p 0 0 1
chr5:136063210|136063431 hsa-miR-452-5p 0 0 1
chr5:136063210|136063431 hsa-miR-452-3p 0 0 1
chr5:136063210|136063431 hsa-miR-607 0 0 1
chr5:136063210|136063431 hsa-miR-625-5p 0 0 1
chr5:136063210|136063431 hsa-miR-625-3p 0 0 1
chr5:136063210|136063431 hsa-miR-1323 0 0 1
chr5:136063210|136063431 hsa-miR-765 0 1 1
chr5:136063210|136063431 hsa-miR-1305 0 0 1
chr5:136063210|136063431 hsa-miR-548o-3p 0 0 1
chr5:136063210|136063431 hsa-miR-1275 1 1 1
chr5:136063210|136063431 hsa-miR-548o 0 0 1
chr5:136063210|136063431 hsa-miR-127-5p 0 0 1
chr5:136063210|136063431 hsa-miR-491-5p 0 0 1
chr5:136063210|136063431 hsa-miR-767-5p 0 1 1
chr5:136063210|136063431 hsa-miR-299-3p 0 0 1
chr5:136063210|136063431 hsa-miR-576-3p 0 0 1
chr5:136063210|136063431 hsa-miR-502-3p 0 1 1
chr5:136063210|136063431 hsa-miR-501-3p 0 1 1
chr5:136063210|136063431 hsa-miR-924 0 1 0
chr5:136063210|136063431 hsa-miR-3175 1 0 0
chr5:136063210|136063431 hsa-miR-4322 1 0 0
chr5:136063210|136063431 hsa-miR-4510 1 1 0
chr5:136063210|136063431 hsa-miR-4644 1 0 0
chr5:136063210|136063431 hsa-miR-4739 1 0 0
chr5:136063210|136063431 hsa-miR-5698 1 0 0
chr5:136063210|136063431 hsa-miR-5739 1 0 0
chr5:136063210|136063431 hsa-miR-6081 1 0 0
chr5:136063210|136063431 hsa-miR-6090 1 0 0
chr5:136063210|136063431 hsa-miR-6127 1 0 0
chr5:136063210|136063431 hsa-miR-6129 1 1 0
chr5:136063210|136063431 hsa-miR-6130 1 1 0
chr5:136063210|136063431 hsa-miR-6133 1 1 0
chr5:136063210|136063431 hsa-miR-7706 1 0 0
chr5:136063210|136063431 hsa-miR-8060 1 1 0
chr5:136063210|136063431 hsa-miR-8085 1 1 0
chr5:136063210|136063431 hsa-miR-3150a-3p 1 0 0
chr5:136063210|136063431 hsa-miR-7106-5p 1 1 0
chr5:136063210|136063431 hsa-miR-6825-5p 0 1 0
chr5:136063210|136063431 hsa-miR-6894-5p 1 0 0
chr5:136063210|136063431 hsa-miR-5187-5p 0 1 0
chr5:136063210|136063431 hsa-miR-7847-3p 1 0 0
chr5:136063210|136063431 hsa-miR-4722-5p 1 1 0
chr5:136063210|136063431 hsa-miR-6873-3p 1 0 0
chr5:136063210|136063431 hsa-miR-7845-5p 1 0 0
chr5:136063210|136063431 hsa-miR-3605-5p 1 1 0
chr5:136063210|136063431 hsa-miR-6796-5p 0 1 0
chr5:136063210|136063431 hsa-miR-6798-5p 1 0 0
chr5:136063210|136063431 hsa-miR-3126-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6760-5p 1 1 0
chr5:136063210|136063431 hsa-miR-7109-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6771-5p 1 0 0
chr5:136063210|136063431 hsa-miR-4717-3p 1 0 0
chr5:136063210|136063431 hsa-miR-3202 1 0 0
chr5:136063210|136063431 hsa-miR-149-3p 1 0 0
chr5:136063210|136063431 hsa-miR-6824-5p 1 0 0
chr5:136063210|136063431 hsa-miR-423-5p 1 0 0
chr5:136063210|136063431 hsa-miR-493-5p 0 1 0
chr5:136063210|136063431 hsa-miR-6787-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6870-5p 1 1 0
chr5:136063210|136063431 hsa-miR-1343-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6743-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6756-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6803-5p 1 0 0
chr5:136063210|136063431 hsa-miR-7110-5p 0 1 0
chr5:136063210|136063431 hsa-miR-11181-3p 0 1 0
chr5:136063210|136063431 hsa-miR-1249-5p 1 1 0
chr5:136063210|136063431 hsa-miR-6779-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6780a-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6797-5p 1 1 0
chr5:136063210|136063431 hsa-miR-6808-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6875-5p 1 0 0
chr5:136063210|136063431 hsa-miR-7111-5p 1 1 0
chr5:136063210|136063431 hsa-miR-3620-5p 1 0 0
chr5:136063210|136063431 hsa-miR-4728-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6794-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6795-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6883-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6887-5p 1 0 0
chr5:136063210|136063431 hsa-miR-4723-5p 1 1 0
chr5:136063210|136063431 hsa-miR-939-5p 1 0 0
chr5:136063210|136063431 hsa-miR-30c-1-3p 1 0 0
chr5:136063210|136063431 hsa-miR-6731-5p 1 1 0
chr5:136063210|136063431 hsa-miR-4665-5p 0 1 0
chr5:136063210|136063431 hsa-miR-6891-5p 1 0 0
chr5:136063210|136063431 hsa-miR-4716-3p 1 1 0
chr5:136063210|136063431 hsa-miR-6785-5p 1 0 0
chr5:136063210|136063431 hsa-miR-6724-5p 1 0 0
chr5:136063210|136063431 hsa-miR-3928-5p 1 0 0
chr5:136063210|136063431 hsa-miR-4768-5p 0 1 0
chr5:136063210|136063431 hsa-miR-548ay-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:136063210|136063431
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MVLKTFKQSLWKSERNWRRAAVVHSSCSASS
Nucleotide Sequence TTGGTTTTGAAAACATTCAAACAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGCTAA
CircID chr5:136063210|136063431
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MHHGSSPPISLRFPQRLFECFQNQVSHFNVHGPHHNEM
Nucleotide Sequence ATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTGTTTGAATGTTTTCAAAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGA
CircID chr5:136063210|136063431
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MNVFKTKYHTLMYMGRTIMRCEPCACGGGGREMYFLNHVPPKHG
Nucleotide Sequence TTGAATGTTTTCAAAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAGGGAGAGAGATGTACTTTTTAAATCATGTTCCCCCTAAACATGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab