CircRNA Information

General Information
circRNA Basic Information
CircID chr5:138426975|138428086
Strand +
CircType exon
Host Gene ENSG00000120733.13;
Algorism find_circ;CIRI2;DCC;
Sequence AACGACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGGGGAAGATTTTCGAGACATGATGCCAACCAGGGTTGATAACAGCAGAAGATAGAAGAGTTGGTACAACAAATCTTCACTTAGATGTGTCTGATGCTGTTAATGTGATGGTGTATGTTGGGATTCCCATCGGGGAGGGTGCTCATGATGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr5:138426975|138428086 NOP56 1 0 0
chr5:138426975|138428086 MOV10 0 1 0
chr5:138426975|138428086 ELAVL1 3 4 2
chr5:138426975|138428086 NUMA1 0 1 0
chr5:138426975|138428086 CNBP 0 0 2
chr5:138426975|138428086 SLBP 0 1 0
chr5:138426975|138428086 UPF1 0 1 0
chr5:138426975|138428086 FMR1 0 0 8
chr5:138426975|138428086 CPSF6 0 1 0
chr5:138426975|138428086 TROVE2 0 1 0
chr5:138426975|138428086 DGCR8 0 0 1
chr5:138426975|138428086 SRSF1 0 1 1
chr5:138426975|138428086 NOP58 2 2 1
chr5:138426975|138428086 U2AF1 0 2 0
chr5:138426975|138428086 U2AF2 4 10 1
chr5:138426975|138428086 DDX54 1 0 7
chr5:138426975|138428086 HNRNPA2B1 4 0 0
chr5:138426975|138428086 AUH 0 1 0
chr5:138426975|138428086 FIP1L1 0 1 0
chr5:138426975|138428086 PTBP1 0 0 1
chr5:138426975|138428086 HNRNPC 0 6 0
chr5:138426975|138428086 TRA2A 0 0 2
chr5:138426975|138428086 KHSRP 0 1 0
chr5:138426975|138428086 MSI2 0 1 2
chr5:138426975|138428086 LIN28B 1 1 5
chr5:138426975|138428086 LIN28A 0 0 1
chr5:138426975|138428086 FXR2 0 0 4
chr5:138426975|138428086 IGF2BP1 0 0 1
chr5:138426975|138428086 IGF2BP3 1 0 3
chr5:138426975|138428086 IGF2BP2 1 1 3
chr5:138426975|138428086 TARDBP 0 0 1
chr5:138426975|138428086 BUD13 1 0 1
chr5:138426975|138428086 RBFOX2 1 0 0
chr5:138426975|138428086 PRPF8 2 5 2
chr5:138426975|138428086 DDX42 0 1 0
chr5:138426975|138428086 CSTF2T 0 0 1
chr5:138426975|138428086 TIA1 0 1 0
chr5:138426975|138428086 AGO2 1 0 1
chr5:138426975|138428086 EIF4A3 3 1 4
chr5:138426975|138428086 FBL 1 2 1