CircRNA Information

General Information
circRNA Basic Information
CircID chr5:138466813|138466964
Strand -
CircType exon
Host Gene ENSG00000120738.7;
Algorism CIRI2;
Sequence CCCAGCCAAACCACTCGACTGCCCCCCATCACCTATACTGGCCGCTTTTCCCTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTCGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:138466813|138466964 hsa-miR-484 0 0 1
chr5:138466813|138466964 hsa-miR-624-5p 0 0 1
chr5:138466813|138466964 hsa-miR-624-3p 0 0 1
chr5:138466813|138466964 hsa-miR-647 0 0 1
chr5:138466813|138466964 hsa-miR-1178-5p 0 0 1
chr5:138466813|138466964 hsa-miR-1178-3p 0 0 1
chr5:138466813|138466964 hsa-miR-1208 0 1 1
chr5:138466813|138466964 hsa-miR-1262 0 0 1
chr5:138466813|138466964 hsa-miR-140-5p 0 0 1
chr5:138466813|138466964 hsa-miR-486-3p 1 1 1
chr5:138466813|138466964 hsa-miR-423-5p 1 0 1
chr5:138466813|138466964 hsa-miR-151-5p 0 0 1
chr5:138466813|138466964 hsa-miR-449a 1 0 0
chr5:138466813|138466964 hsa-miR-611 1 0 0
chr5:138466813|138466964 hsa-miR-663a 1 0 0
chr5:138466813|138466964 hsa-miR-762 1 0 0
chr5:138466813|138466964 hsa-miR-665 1 0 0
chr5:138466813|138466964 hsa-miR-1183 1 0 0
chr5:138466813|138466964 hsa-miR-1275 1 0 0
chr5:138466813|138466964 hsa-miR-1538 1 0 0
chr5:138466813|138466964 hsa-miR-3131 1 0 0
chr5:138466813|138466964 hsa-miR-3138 1 0 0
chr5:138466813|138466964 hsa-miR-3147 1 0 0
chr5:138466813|138466964 hsa-miR-3155a 0 1 0
chr5:138466813|138466964 hsa-miR-3196 1 0 0
chr5:138466813|138466964 hsa-miR-4259 1 0 0
chr5:138466813|138466964 hsa-miR-4252 0 1 0
chr5:138466813|138466964 hsa-miR-4270 1 0 0
chr5:138466813|138466964 hsa-miR-3665 1 0 0
chr5:138466813|138466964 hsa-miR-3937 1 0 0
chr5:138466813|138466964 hsa-miR-4425 1 0 0
chr5:138466813|138466964 hsa-miR-4447 1 0 0
chr5:138466813|138466964 hsa-miR-4457 0 1 0
chr5:138466813|138466964 hsa-miR-4466 1 0 0
chr5:138466813|138466964 hsa-miR-4467 1 0 0
chr5:138466813|138466964 hsa-miR-4481 1 0 0
chr5:138466813|138466964 hsa-miR-4488 1 0 0
chr5:138466813|138466964 hsa-miR-4506 1 0 0
chr5:138466813|138466964 hsa-miR-4507 1 1 0
chr5:138466813|138466964 hsa-miR-4516 1 0 0
chr5:138466813|138466964 hsa-miR-4534 1 0 0
chr5:138466813|138466964 hsa-miR-4651 1 0 0
chr5:138466813|138466964 hsa-miR-4674 1 1 0
chr5:138466813|138466964 hsa-miR-4688 1 0 0
chr5:138466813|138466964 hsa-miR-4689 1 0 0
chr5:138466813|138466964 hsa-miR-4710 1 0 0
chr5:138466813|138466964 hsa-miR-4721 1 0 0
chr5:138466813|138466964 hsa-miR-4734 1 0 0
chr5:138466813|138466964 hsa-miR-4741 1 0 0
chr5:138466813|138466964 hsa-miR-5090 1 0 0
chr5:138466813|138466964 hsa-miR-5194 1 0 0
chr5:138466813|138466964 hsa-miR-5698 1 0 0
chr5:138466813|138466964 hsa-miR-6085 0 1 0
chr5:138466813|138466964 hsa-miR-6134 1 0 0
chr5:138466813|138466964 hsa-miR-8072 1 0 0
chr5:138466813|138466964 hsa-miR-8075 1 0 0
chr5:138466813|138466964 hsa-miR-12121 1 0 0
chr5:138466813|138466964 hsa-miR-125b-2-3p 1 0 0
chr5:138466813|138466964 hsa-miR-4731-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6765-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6825-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6894-5p 1 0 0
chr5:138466813|138466964 hsa-miR-4687-3p 1 0 0
chr5:138466813|138466964 hsa-miR-6728-5p 1 0 0
chr5:138466813|138466964 hsa-miR-139-3p 1 0 0
chr5:138466813|138466964 hsa-miR-6089 1 1 0
chr5:138466813|138466964 hsa-miR-6880-5p 1 0 0
chr5:138466813|138466964 hsa-miR-4695-5p 1 1 0
chr5:138466813|138466964 hsa-miR-4709-3p 0 1 0
chr5:138466813|138466964 hsa-miR-7160-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6890-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6741-5p 1 0 0
chr5:138466813|138466964 hsa-miR-181a-2-3p 0 1 0
chr5:138466813|138466964 hsa-miR-197-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6776-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6742-5p 1 0 0
chr5:138466813|138466964 hsa-miR-3180-3p 1 0 0
chr5:138466813|138466964 hsa-miR-6772-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6793-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6732-5p 1 0 0
chr5:138466813|138466964 hsa-miR-3150b-3p 1 0 0
chr5:138466813|138466964 hsa-miR-6888-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6786-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6835-5p 1 0 0
chr5:138466813|138466964 hsa-miR-7109-5p 1 0 0
chr5:138466813|138466964 hsa-miR-3944-3p 1 0 0
chr5:138466813|138466964 hsa-miR-4640-5p 1 0 0
chr5:138466813|138466964 hsa-miR-144-3p 0 1 0
chr5:138466813|138466964 hsa-miR-4743-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6800-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6802-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6781-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6877-5p 1 0 0
chr5:138466813|138466964 hsa-let-7i-5p 1 0 0
chr5:138466813|138466964 hsa-miR-744-5p 1 0 0
chr5:138466813|138466964 hsa-miR-7113-5p 0 1 0
chr5:138466813|138466964 hsa-miR-2277-5p 1 0 0
chr5:138466813|138466964 hsa-miR-4796-3p 0 1 0
chr5:138466813|138466964 hsa-miR-513b-5p 0 1 0
chr5:138466813|138466964 hsa-miR-10400-5p 1 0 0
chr5:138466813|138466964 hsa-miR-1233-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6769b-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6778-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6787-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6816-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6737-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6743-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6754-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6756-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6803-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6813-5p 1 1 0
chr5:138466813|138466964 hsa-miR-6815-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6851-5p 1 0 0
chr5:138466813|138466964 hsa-miR-11181-3p 1 0 0
chr5:138466813|138466964 hsa-miR-6751-5p 1 0 0
chr5:138466813|138466964 hsa-miR-7111-5p 1 0 0
chr5:138466813|138466964 hsa-miR-3620-5p 1 0 0
chr5:138466813|138466964 hsa-miR-10396a-5p 1 0 0
chr5:138466813|138466964 hsa-miR-10396b-5p 1 0 0
chr5:138466813|138466964 hsa-miR-1237-5p 1 0 0
chr5:138466813|138466964 hsa-miR-1909-3p 1 0 0
chr5:138466813|138466964 hsa-miR-328-5p 1 1 0
chr5:138466813|138466964 hsa-miR-4685-5p 1 0 0
chr5:138466813|138466964 hsa-miR-4701-3p 1 0 0
chr5:138466813|138466964 hsa-miR-4745-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6738-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6777-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6795-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6846-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6848-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6858-5p 1 1 0
chr5:138466813|138466964 hsa-miR-6887-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6889-5p 1 0 0
chr5:138466813|138466964 hsa-miR-4697-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6885-5p 1 1 0
chr5:138466813|138466964 hsa-miR-3940-5p 1 1 0
chr5:138466813|138466964 hsa-miR-4665-5p 1 0 0
chr5:138466813|138466964 hsa-miR-6736-5p 1 0 0
chr5:138466813|138466964 hsa-miR-4472 1 0 0
chr5:138466813|138466964 hsa-miR-3184-5p 0 1 0
chr5:138466813|138466964 hsa-miR-4756-5p 1 0 0
chr5:138466813|138466964 hsa-miR-449b-5p 1 0 0
chr5:138466813|138466964 hsa-miR-3059-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr5:138466813|138466964
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MPPITYTGRFSLEPAPNSGNTLWPEPLFSLVSGLVSMTNPPASS
Nucleotide Sequence CTGCCCCCCATCACCTATACTGGCCGCTTTTCCCTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTCG
CircID chr5:138466813|138466964
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MAAFPWSLHPTVATPCGPSPSSAWSVA
Nucleotide Sequence CTGGCCGCTTTTCCCTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAG
CircID chr5:138466813|138466964
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MVMLTRPLTKLKRGSGHKVLPLLGAGSREKRPV
Nucleotide Sequence TTGGTCATGCTCACTAGGCCACTGACCAAGCTGAAGAGGGGCTCGGGCCACAAGGTGTTGCCACTGTTGGGTGCAGGCTCCAGGGAAAAGCGGCCAGTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab