CircRNA Information

General Information
circRNA Basic Information
CircID chr5:138466832|138467016
Strand -
CircType exon
Host Gene ENSG00000120738.7;
Algorism CIRI2;
Sequence TGCCCCCCATCACCTATACTGGCCGCTTTTCCCTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTCGTCCTCAGCACCATCTCCAGCGGCCTCCTCCGCCTCCGCCTCCCAGAGCCCACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:138466832|138467016 hsa-miR-326 0 0 1
chr5:138466832|138467016 hsa-miR-484 0 0 1
chr5:138466832|138467016 hsa-miR-620 0 0 1
chr5:138466832|138467016 hsa-miR-624-5p 0 0 1
chr5:138466832|138467016 hsa-miR-624-3p 0 0 1
chr5:138466832|138467016 hsa-miR-658 1 0 1
chr5:138466832|138467016 hsa-miR-765 0 0 1
chr5:138466832|138467016 hsa-miR-541-5p 0 0 1
chr5:138466832|138467016 hsa-miR-541-3p 0 0 1
chr5:138466832|138467016 hsa-miR-760 1 0 1
chr5:138466832|138467016 hsa-miR-1178-5p 0 0 1
chr5:138466832|138467016 hsa-miR-1178-3p 0 0 1
chr5:138466832|138467016 hsa-miR-1208 0 0 1
chr5:138466832|138467016 hsa-miR-1262 0 0 1
chr5:138466832|138467016 hsa-miR-1270 0 0 1
chr5:138466832|138467016 hsa-miR-1224-5p 1 0 1
chr5:138466832|138467016 hsa-miR-423-5p 0 0 1
chr5:138466832|138467016 hsa-miR-654-5p 1 0 1
chr5:138466832|138467016 hsa-miR-330-5p 0 0 1
chr5:138466832|138467016 hsa-miR-151-5p 0 0 1
chr5:138466832|138467016 hsa-miR-611 1 0 0
chr5:138466832|138467016 hsa-miR-663a 1 0 0
chr5:138466832|138467016 hsa-miR-762 1 0 0
chr5:138466832|138467016 hsa-miR-665 1 0 0
chr5:138466832|138467016 hsa-miR-1183 1 0 0
chr5:138466832|138467016 hsa-miR-1268a 1 0 0
chr5:138466832|138467016 hsa-miR-1538 1 0 0
chr5:138466832|138467016 hsa-miR-3131 1 0 0
chr5:138466832|138467016 hsa-miR-3138 1 0 0
chr5:138466832|138467016 hsa-miR-3147 1 0 0
chr5:138466832|138467016 hsa-miR-1193 1 0 0
chr5:138466832|138467016 hsa-miR-3196 1 0 0
chr5:138466832|138467016 hsa-miR-3197 1 0 0
chr5:138466832|138467016 hsa-miR-4296 1 0 0
chr5:138466832|138467016 hsa-miR-4322 1 0 0
chr5:138466832|138467016 hsa-miR-4259 1 0 0
chr5:138466832|138467016 hsa-miR-4265 1 0 0
chr5:138466832|138467016 hsa-miR-3652 1 0 0
chr5:138466832|138467016 hsa-miR-3907 1 0 0
chr5:138466832|138467016 hsa-miR-3937 1 0 0
chr5:138466832|138467016 hsa-miR-1268b 1 0 0
chr5:138466832|138467016 hsa-miR-4425 1 0 0
chr5:138466832|138467016 hsa-miR-4437 1 0 0
chr5:138466832|138467016 hsa-miR-3135b 1 0 0
chr5:138466832|138467016 hsa-miR-4466 1 0 0
chr5:138466832|138467016 hsa-miR-4467 1 0 0
chr5:138466832|138467016 hsa-miR-3689c 1 0 0
chr5:138466832|138467016 hsa-miR-4481 1 0 0
chr5:138466832|138467016 hsa-miR-4488 1 0 0
chr5:138466832|138467016 hsa-miR-4507 1 0 0
chr5:138466832|138467016 hsa-miR-4516 1 0 0
chr5:138466832|138467016 hsa-miR-4525 1 0 0
chr5:138466832|138467016 hsa-miR-1587 1 0 0
chr5:138466832|138467016 hsa-miR-3960 1 0 0
chr5:138466832|138467016 hsa-miR-4647 1 0 0
chr5:138466832|138467016 hsa-miR-4654 1 0 0
chr5:138466832|138467016 hsa-miR-4656 1 0 0
chr5:138466832|138467016 hsa-miR-4674 1 0 0
chr5:138466832|138467016 hsa-miR-4689 1 0 0
chr5:138466832|138467016 hsa-miR-4721 1 0 0
chr5:138466832|138467016 hsa-miR-4734 1 0 0
chr5:138466832|138467016 hsa-miR-4767 1 0 0
chr5:138466832|138467016 hsa-miR-4784 1 0 0
chr5:138466832|138467016 hsa-miR-5787 1 0 0
chr5:138466832|138467016 hsa-miR-6088 1 0 0
chr5:138466832|138467016 hsa-miR-6134 1 0 0
chr5:138466832|138467016 hsa-miR-8089 1 0 0
chr5:138466832|138467016 hsa-miR-12114 1 0 0
chr5:138466832|138467016 hsa-miR-12121 1 0 0
chr5:138466832|138467016 hsa-miR-125b-2-3p 1 0 0
chr5:138466832|138467016 hsa-miR-370-3p 1 0 0
chr5:138466832|138467016 hsa-miR-128-1-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6765-5p 1 0 0
chr5:138466832|138467016 hsa-miR-7106-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6825-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6894-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6857-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4687-3p 1 0 0
chr5:138466832|138467016 hsa-miR-6799-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6728-5p 1 0 0
chr5:138466832|138467016 hsa-miR-8071 1 0 0
chr5:138466832|138467016 hsa-miR-766-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6089 1 0 0
chr5:138466832|138467016 hsa-miR-3192-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6757-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6880-5p 1 0 0
chr5:138466832|138467016 hsa-miR-7847-3p 1 0 0
chr5:138466832|138467016 hsa-miR-4695-5p 1 0 0
chr5:138466832|138467016 hsa-miR-7160-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6741-5p 1 0 0
chr5:138466832|138467016 hsa-miR-8069 1 0 0
chr5:138466832|138467016 hsa-miR-6776-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6742-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6716-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3180-3p 1 0 0
chr5:138466832|138467016 hsa-miR-6772-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6793-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6805-5p 1 0 0
chr5:138466832|138467016 hsa-miR-2467-3p 1 0 0
chr5:138466832|138467016 hsa-miR-3150b-3p 1 0 0
chr5:138466832|138467016 hsa-miR-6810-5p 1 0 0
chr5:138466832|138467016 hsa-miR-30b-3p 1 0 0
chr5:138466832|138467016 hsa-miR-5008-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6786-5p 1 0 0
chr5:138466832|138467016 hsa-miR-7109-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1226-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6740-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3944-3p 1 0 0
chr5:138466832|138467016 hsa-miR-4640-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3691-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1908-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6771-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6749-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4743-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3648 1 0 0
chr5:138466832|138467016 hsa-miR-4787-5p 1 0 0
chr5:138466832|138467016 hsa-miR-149-3p 1 0 0
chr5:138466832|138467016 hsa-miR-6781-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6877-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3191-3p 1 0 0
chr5:138466832|138467016 hsa-miR-1250-5p 1 0 0
chr5:138466832|138467016 hsa-miR-744-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4746-3p 1 0 0
chr5:138466832|138467016 hsa-miR-2277-5p 1 0 0
chr5:138466832|138467016 hsa-miR-10400-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1233-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1273h-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3689b-3p 1 0 0
chr5:138466832|138467016 hsa-miR-4763-3p 1 0 0
chr5:138466832|138467016 hsa-miR-6769b-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6778-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6787-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6816-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6870-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1343-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3180 1 0 0
chr5:138466832|138467016 hsa-miR-6743-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6754-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6756-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6769a-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6813-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6815-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6851-5p 1 0 0
chr5:138466832|138467016 hsa-miR-11181-3p 1 0 0
chr5:138466832|138467016 hsa-miR-1249-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6779-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6780a-5p 1 0 0
chr5:138466832|138467016 hsa-miR-7111-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3620-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4728-5p 1 0 0
chr5:138466832|138467016 hsa-miR-10396a-5p 1 0 0
chr5:138466832|138467016 hsa-miR-10396b-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1237-5p 1 0 0
chr5:138466832|138467016 hsa-miR-328-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3689a-3p 1 0 0
chr5:138466832|138467016 hsa-miR-4649-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4745-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6729-5p 1 0 0
chr5:138466832|138467016 hsa-miR-675-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6848-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6858-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6883-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6889-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6831-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3940-5p 1 0 0
chr5:138466832|138467016 hsa-miR-1914-3p 1 0 0
chr5:138466832|138467016 hsa-miR-6736-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6855-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4700-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4646-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6785-5p 1 0 0
chr5:138466832|138467016 hsa-miR-4667-5p 1 0 0
chr5:138466832|138467016 hsa-miR-10400-3p 1 0 0
chr5:138466832|138467016 hsa-miR-4756-5p 1 0 0
chr5:138466832|138467016 hsa-miR-6884-5p 1 0 0
chr5:138466832|138467016 hsa-miR-3059-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:138466832|138467016
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MAAFPWSLHPTVATPCGPSPSSAWSVA
Nucleotide Sequence CTGGCCGCTTTTCCCTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAG
CircID chr5:138466832|138467016
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MEPAPNSGNTLWPEPLFSLVSGLVSMTNPPASSSSAPSPAASSASASQSPP
Nucleotide Sequence CTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTCGTCCTCAGCACCATCTCCAGCGGCCTCCTCCGCCTCCGCCTCCCAGAGCCCACCC
CircID chr5:138466832|138467016
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MVMLTRPLTKLKRGSGHKVLPLLGAGSREKRPV
Nucleotide Sequence TTGGTCATGCTCACTAGGCCACTGACCAAGCTGAAGAGGGGCTCGGGCCACAAGGTGTTGCCACTGTTGGGTGCAGGCTCCAGGGAAAAGCGGCCAGTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab