CircRNA Information

General Information
circRNA Basic Information
CircID chr5:139015474|139015618
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTCATAAGAAAAATCTGGAAGTAGATGGTTCCAAAATCACGAAAGTGGCTAAACTACATCATAAATAACCCAGTTTCCTCCTCCTGTCTTTCGCCTCTATTATCCTCCTCAGCATGTTGGCTTTTTGTTCTTGTGCTTCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:139015474|139015618 hsa-miR-765 1 0 1
chr5:139015474|139015618 hsa-miR-1253 0 0 1
chr5:139015474|139015618 hsa-miR-1272 0 0 1
chr5:139015474|139015618 hsa-miR-1322 0 0 1
chr5:139015474|139015618 hsa-miR-525-5p 0 0 1
chr5:139015474|139015618 hsa-miR-520a-5p 0 0 1
chr5:139015474|139015618 hsa-miR-1300 0 0 1
chr5:139015474|139015618 hsa-miR-1185 0 0 1
chr5:139015474|139015618 hsa-miR-1275 1 0 0
chr5:139015474|139015618 hsa-miR-2110 1 0 0
chr5:139015474|139015618 hsa-miR-4514 1 0 0
chr5:139015474|139015618 hsa-miR-4656 1 0 0
chr5:139015474|139015618 hsa-miR-4689 1 0 0
chr5:139015474|139015618 hsa-miR-4739 1 0 0
chr5:139015474|139015618 hsa-miR-4784 1 0 0
chr5:139015474|139015618 hsa-miR-5787 1 0 0
chr5:139015474|139015618 hsa-miR-6133 1 0 0
chr5:139015474|139015618 hsa-miR-6165 1 0 0
chr5:139015474|139015618 hsa-miR-8089 1 0 0
chr5:139015474|139015618 hsa-miR-9718 1 0 0
chr5:139015474|139015618 hsa-miR-12118 1 0 0
chr5:139015474|139015618 hsa-miR-4433b-3p 1 0 0
chr5:139015474|139015618 hsa-miR-6734-5p 1 0 0
chr5:139015474|139015618 hsa-miR-4433a-3p 1 0 0
chr5:139015474|139015618 hsa-miR-6765-5p 1 0 0
chr5:139015474|139015618 hsa-miR-7106-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6825-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6894-5p 1 0 0
chr5:139015474|139015618 hsa-miR-25-5p 1 0 0
chr5:139015474|139015618 hsa-miR-766-5p 1 0 0
chr5:139015474|139015618 hsa-miR-1236-5p 1 0 0
chr5:139015474|139015618 hsa-miR-5187-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6515-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6880-5p 1 0 0
chr5:139015474|139015618 hsa-miR-7847-3p 1 0 0
chr5:139015474|139015618 hsa-miR-4695-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6746-5p 1 0 0
chr5:139015474|139015618 hsa-miR-4722-5p 1 0 0
chr5:139015474|139015618 hsa-miR-3682-3p 1 0 0
chr5:139015474|139015618 hsa-miR-3605-5p 1 0 0
chr5:139015474|139015618 hsa-miR-3180-3p 1 0 0
chr5:139015474|139015618 hsa-miR-6732-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6798-5p 1 0 0
chr5:139015474|139015618 hsa-miR-1224-5p 1 0 0
chr5:139015474|139015618 hsa-miR-2467-3p 1 0 0
chr5:139015474|139015618 hsa-miR-1229-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6771-5p 1 0 0
chr5:139015474|139015618 hsa-miR-877-5p 1 0 0
chr5:139015474|139015618 hsa-miR-7854-3p 1 0 0
chr5:139015474|139015618 hsa-miR-6789-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6877-5p 1 0 0
chr5:139015474|139015618 hsa-miR-5010-5p 1 0 0
chr5:139015474|139015618 hsa-miR-483-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6787-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6870-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6893-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6743-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6769a-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6819-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6851-5p 1 0 0
chr5:139015474|139015618 hsa-miR-11181-3p 1 0 0
chr5:139015474|139015618 hsa-miR-1249-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6797-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6808-5p 1 0 0
chr5:139015474|139015618 hsa-miR-7111-5p 1 0 0
chr5:139015474|139015618 hsa-miR-4701-3p 1 0 0
chr5:139015474|139015618 hsa-miR-6738-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6794-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6858-5p 1 0 0
chr5:139015474|139015618 hsa-miR-4758-5p 1 0 0
chr5:139015474|139015618 hsa-miR-6856-5p 1 0 0
chr5:139015474|139015618 hsa-miR-3173-3p 1 0 0
chr5:139015474|139015618 hsa-miR-3679-5p 1 0 0
chr5:139015474|139015618 hsa-miR-4716-3p 1 0 0
chr5:139015474|139015618 hsa-miR-6750-5p 1 0 0
chr5:139015474|139015618 hsa-miR-4667-5p 1 0 0
chr5:139015474|139015618 hsa-miR-7161-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:139015474|139015618
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MVPKSRKWLNYIINNPVSSSCLSPLLSSSACWLFVLVLL
Nucleotide Sequence ATGGTTCCAAAATCACGAAAGTGGCTAAACTACATCATAAATAACCCAGTTTCCTCCTCCTGTCTTTCGCCTCTATTATCCTCCTCAGCATGTTGGCTTTTTGTTCTTGTGCTTCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab