CircNet

General Information

circRNA Basic Information

CircID	chr5:13913743\|13913949
Strand	-
CircType	exon
Host Gene	ENSG00000039139.9;
Algorism	CIRI2;
Sequence	CTGGTATTTAGTGGCCATGTCTTCCAGCCCTTCAATTGTGGAATCTTGCAGGACTGAATACGTCTTGAGGGTTGTAAAGATGTCTATTATCTTGGCAAGGCGTCGGTGAAAAGTTTCGAATTTTCCAAAAATATACATCTCGCTAAAATCAAATTGTTTTGCATTTGGATTTTGTTTAAGCTTTTGTTTTGTCTTGTGAAAGCAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:13913743\|13913949	hsa-miR-588	0	0	1
chr5:13913743\|13913949	hsa-miR-641	0	0	1
chr5:13913743\|13913949	hsa-miR-513b-5p	0	0	1
chr5:13913743\|13913949	hsa-miR-513b-3p	0	0	1
chr5:13913743\|13913949	hsa-miR-455-3p	0	0	1
chr5:13913743\|13913949	hsa-miR-105	0	0	1
chr5:13913743\|13913949	hsa-miR-7	0	0	1
chr5:13913743\|13913949	hsa-miR-762	0	1	0
chr5:13913743\|13913949	hsa-miR-4420	1	0	0
chr5:13913743\|13913949	hsa-miR-4498	0	1	0
chr5:13913743\|13913949	hsa-miR-4656	1	0	0
chr5:13913743\|13913949	hsa-miR-4801	0	1	0
chr5:13913743\|13913949	hsa-miR-6515-5p	1	1	0
chr5:13913743\|13913949	hsa-miR-6749-5p	1	0	0
chr5:13913743\|13913949	hsa-miR-4446-3p	0	1	0
chr5:13913743\|13913949	hsa-miR-2276-3p	0	1	0
chr5:13913743\|13913949	hsa-miR-6864-5p	0	1	0
chr5:13913743\|13913949	hsa-miR-1910-5p	0	1	0
chr5:13913743\|13913949	hsa-miR-135a-2-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:13913743\|13913949
ORF Type	ORF1
Protein Length	30
Nucleotide Length	93
Protein Sequence	MSSSPSIVESCRTEYVLRVVKMSIILARRR
Nucleotide Sequence	ATGTCTTCCAGCCCTTCAATTGTGGAATCTTGCAGGACTGAATACGTCTTGAGGGTTGTAAAGATGTCTATTATCTTGGCAAGGCGTCGGTGA

CircID	chr5:13913743\|13913949
ORF Type	ORF2
Protein Length	46
Nucleotide Length	138
Protein Sequence	MYIFGKFETFHRRLAKIIDIFTTLKTYSVLQDSTIEGLEDMATKYQ
Nucleotide Sequence	ATGTATATTTTTGGAAAATTCGAAACTTTTCACCGACGCCTTGCCAAGATAATAGACATCTTTACAACCCTCAAGACGTATTCAGTCCTGCAAGATTCCACAATTGAAGGGCTGGAAGACATGGCCACTAAATACCAG

CircID	chr5:13913743\|13913949
ORF Type	ORF3
Protein Length	25
Nucleotide Length	78
Protein Sequence	MQNNLILARCIFLENSKLFTDALPR
Nucleotide Sequence	ATGCAAAACAATTTGATTTTAGCGAGATGTATATTTTTGGAAAATTCGAAACTTTTCACCGACGCCTTGCCAAGATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information