CircRNA Information

General Information
circRNA Basic Information
CircID chr5:139665618|139665803
Strand +
CircType exon
Host Gene ENSG00000171604.10;
Algorism CIRI2;
Sequence CTGTTCCAGGGCTGCCCAGCCAGGTCACCGGGGTCCCTCTGCCCAGCTTGCCCGGAAGCTGCACGTCTCCAGTGGGTCAGCACTGACGTCAGCAAGACTGGCCGGGCGTGGAGCCCGCCACCTCCGGAACCACCAATTAATTAACTTTTTCAAATTAATTTCCCAAGCAAAATTCCATAATTACAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:139665618|139665803 hsa-miR-148a-5p 0 0 1
chr5:139665618|139665803 hsa-miR-148a-3p 0 0 1
chr5:139665618|139665803 hsa-miR-152-5p 0 0 1
chr5:139665618|139665803 hsa-miR-152-3p 0 0 1
chr5:139665618|139665803 hsa-miR-380-5p 0 0 1
chr5:139665618|139665803 hsa-miR-380-3p 0 0 1
chr5:139665618|139665803 hsa-miR-148b-5p 0 0 1
chr5:139665618|139665803 hsa-miR-148b-3p 0 0 1
chr5:139665618|139665803 hsa-miR-431-5p 0 0 1
chr5:139665618|139665803 hsa-miR-431-3p 0 0 1
chr5:139665618|139665803 hsa-miR-612 1 1 1
chr5:139665618|139665803 hsa-miR-631 0 1 1
chr5:139665618|139665803 hsa-miR-1301-5p 0 0 1
chr5:139665618|139665803 hsa-miR-1301-3p 0 0 1
chr5:139665618|139665803 hsa-miR-944 0 0 1
chr5:139665618|139665803 hsa-miR-1203 0 0 1
chr5:139665618|139665803 hsa-miR-512-3p 0 1 1
chr5:139665618|139665803 hsa-miR-876-3p 0 0 1
chr5:139665618|139665803 hsa-miR-628-5p 0 0 1
chr5:139665618|139665803 hsa-miR-323-5p 0 0 1
chr5:139665618|139665803 hsa-miR-1285 0 0 1
chr5:139665618|139665803 hsa-miR-663 0 0 1
chr5:139665618|139665803 hsa-miR-638 1 0 0
chr5:139665618|139665803 hsa-miR-663a 1 0 0
chr5:139665618|139665803 hsa-miR-762 1 0 0
chr5:139665618|139665803 hsa-miR-320e 0 1 0
chr5:139665618|139665803 hsa-miR-3661 0 1 0
chr5:139665618|139665803 hsa-miR-4429 0 1 0
chr5:139665618|139665803 hsa-miR-4497 1 0 0
chr5:139665618|139665803 hsa-miR-4498 1 0 0
chr5:139665618|139665803 hsa-miR-4656 1 0 0
chr5:139665618|139665803 hsa-miR-4721 1 0 0
chr5:139665618|139665803 hsa-miR-5047 0 1 0
chr5:139665618|139665803 hsa-miR-5787 0 1 0
chr5:139665618|139665803 hsa-miR-6134 0 1 0
chr5:139665618|139665803 hsa-miR-6860 1 1 0
chr5:139665618|139665803 hsa-miR-8089 1 0 0
chr5:139665618|139665803 hsa-miR-9718 0 1 0
chr5:139665618|139665803 hsa-miR-6861-5p 1 1 0
chr5:139665618|139665803 hsa-miR-139-3p 0 1 0
chr5:139665618|139665803 hsa-miR-6727-5p 1 0 0
chr5:139665618|139665803 hsa-miR-4655-5p 1 0 0
chr5:139665618|139665803 hsa-miR-197-5p 1 0 0
chr5:139665618|139665803 hsa-miR-4728-3p 0 1 0
chr5:139665618|139665803 hsa-miR-3180-3p 1 0 0
chr5:139665618|139665803 hsa-miR-6765-3p 1 1 0
chr5:139665618|139665803 hsa-miR-615-5p 1 0 0
chr5:139665618|139665803 hsa-miR-7109-5p 1 0 0
chr5:139665618|139665803 hsa-miR-6740-5p 1 0 0
chr5:139665618|139665803 hsa-miR-3677-3p 1 0 0
chr5:139665618|139665803 hsa-miR-4787-5p 0 1 0
chr5:139665618|139665803 hsa-miR-7112-5p 1 0 0
chr5:139665618|139665803 hsa-miR-4707-5p 1 0 0
chr5:139665618|139665803 hsa-miR-4750-3p 0 1 0
chr5:139665618|139665803 hsa-miR-548at-5p 0 1 0
chr5:139665618|139665803 hsa-miR-4763-3p 1 0 0
chr5:139665618|139665803 hsa-miR-6774-5p 1 1 0
chr5:139665618|139665803 hsa-miR-6875-5p 0 1 0
chr5:139665618|139665803 hsa-miR-5189-5p 1 1 0
chr5:139665618|139665803 hsa-miR-6862-5p 1 0 0
chr5:139665618|139665803 hsa-miR-4649-5p 1 0 0
chr5:139665618|139665803 hsa-miR-6729-5p 1 0 0
chr5:139665618|139665803 hsa-miR-6735-5p 1 0 0
chr5:139665618|139665803 hsa-miR-3187-5p 0 1 0
chr5:139665618|139665803 hsa-miR-939-5p 1 0 0
chr5:139665618|139665803 hsa-miR-10398-3p 1 0 0
chr5:139665618|139665803 hsa-miR-3184-5p 1 0 0
chr5:139665618|139665803 hsa-miR-3689d 0 1 0
chr5:139665618|139665803 hsa-miR-6791-5p 1 0 0
chr5:139665618|139665803 hsa-miR-320a-3p 0 1 0
chr5:139665618|139665803 hsa-miR-320b 0 1 0
chr5:139665618|139665803 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:139665618|139665803
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence LFQGCPARSPGSLCPACPEAARLQWVSTDVSKTGRAWSPPPPEPPIN
Nucleotide Sequence CTGTTCCAGGGCTGCCCAGCCAGGTCACCGGGGTCCCTCTGCCCAGCTTGCCCGGAAGCTGCACGTCTCCAGTGGGTCAGCACTGACGTCAGCAAGACTGGCCGGGCGTGGAGCCCGCCACCTCCGGAACCACCAATTAATTAA

CircID chr5:139665618|139665803
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MHVSSGSALTSARLAGRGARHLRNHQLINFFKLISQAKFHNY
Nucleotide Sequence CTGCACGTCTCCAGTGGGTCAGCACTGACGTCAGCAAGACTGGCCGGGCGTGGAGCCCGCCACCTCCGGAACCACCAATTAATTAACTTTTTCAAATTAATTTCCCAAGCAAAATTCCATAATTAC

CircID chr5:139665618|139665803
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MKKLINWWFRRWRAPRPASLADVSADPLETCSFRASWAEGPR
Nucleotide Sequence TTGAAAAAGTTAATTAATTGGTGGTTCCGGAGGTGGCGGGCTCCACGCCCGGCCAGTCTTGCTGACGTCAGTGCTGACCCACTGGAGACGTGCAGCTTCCGGGCAAGCTGGGCAGAGGGACCCCGGTGA

CircID chr5:139665618|139665803
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MLTSVLTHWRRAASGQAGQRDPGDLAGQPWN
Nucleotide Sequence TTGCTGACGTCAGTGCTGACCCACTGGAGACGTGCAGCTTCCGGGCAAGCTGGGCAGAGGGACCCCGGTGACCTGGCTGGGCAGCCCTGGAAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites