CircNet

General Information

circRNA Basic Information

CircID	chr5:139680364\|139681447
Strand	+
CircType	exon
Host Gene	ENSG00000171604.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTGGACCCTCGGCAGTTGGCAGGCTCCCTCTGCAGTGGGGTCTGGGCCTCGGCCCCACCATGTCGAGCCTCGGCGGTGGCTCCCAGGATGCCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCCGCACCAGCCTCAGTGGCAGATGACACACCACCCCCCGAGCGTCGGAACAAGAGCGGTATCATCAGTGAGCCCCTCAACAAGAGCCTGCGCCGCTCCCGCCCGCTCTCCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCGGTGGCAGCATGATGGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAGCGAGGCGGGTGCTGGCCTGCCTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTTCCCCTACCTGGGCGCTTTCCCCATCAACCCAGGCCTCTTCATTATGACCCCGGCAGGTGTGTTCCTGGCCGAGAGCGCGCTGCACATGGCGGGCCTGGCTGAGTACCCCATGCAGGGAGAGCTGGCCTCTGCCATCAGCTCCGGCAAGAAGAAGCGGAAACGCTGCGGCATGTGCGCGCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCAGCAGTTGTAGGAATCGAAAGACTGGCCATCAGATTTGCAAATTCAGAAAATGTGAGGAACTCAAAAAGAAGCCTTCCGCTGCTCTGGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:139680364\|139681447	hsa-miR-346	1	1	1
chr5:139680364\|139681447	hsa-miR-636	1	1	1
chr5:139680364\|139681447	hsa-miR-661	1	1	1
chr5:139680364\|139681447	hsa-miR-2861	1	1	1
chr5:139680364\|139681447	hsa-miR-6071	1	1	1
chr5:139680364\|139681447	hsa-miR-6090	1	1	1
chr5:139680364\|139681447	hsa-miR-8075	1	1	1
chr5:139680364\|139681447	hsa-miR-370-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-128-1-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-4665-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-3157-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-1273h-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-6765-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6861-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6799-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-7851-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-6089	1	1	1
chr5:139680364\|139681447	hsa-miR-4709-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-3677-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-1301-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-145-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-6727-5p	1	1	1
chr5:139680364\|139681447	hsa-let-7i-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-1915-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6827-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-2467-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-4793-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-5008-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6882-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-4713-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6784-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-4640-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6753-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-1908-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-7113-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-296-3p	1	1	1
chr5:139680364\|139681447	hsa-let-7d-5p	1	1	1
chr5:139680364\|139681447	hsa-let-7b-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-4787-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6824-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6789-5p	1	1	1
chr5:139680364\|139681447	hsa-let-7c-5p	1	1	1
chr5:139680364\|139681447	hsa-miR-6746-3p	1	1	1
chr5:139680364\|139681447	hsa-miR-4787-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:139680364\|139681447
ORF Type	ORF1
Protein Length	308
Nucleotide Length	924
Protein Sequence	MSSLGGGSQDAGGSSSSSTNGSGGSGSSGPKAGAADKSAVVAAAAPASVADDTPPPERRNKSGIISEPLNKSLRRSRPLSHYSSFGSSGGSGGGSMMGGESADKATAAAAAASLLANGHDLAAAMAVDKSNPTSKHKSGAVASLLSKAERATELAAEGQLTLQQFAQSTEMLKRVVQEHLPLMSEAGAGLPDMEAVAGAEALNGQSDFPYLGAFPINPGLFIMTPAGVFLAESALHMAGLAEYPMQGELASAISSGKKKRKRCGMCAPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPSAALE
Nucleotide Sequence	ATGTCGAGCCTCGGCGGTGGCTCCCAGGATGCCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCCGCACCAGCCTCAGTGGCAGATGACACACCACCCCCCGAGCGTCGGAACAAGAGCGGTATCATCAGTGAGCCCCTCAACAAGAGCCTGCGCCGCTCCCGCCCGCTCTCCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCGGTGGCAGCATGATGGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAGCGAGGCGGGTGCTGGCCTGCCTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTTCCCCTACCTGGGCGCTTTCCCCATCAACCCAGGCCTCTTCATTATGACCCCGGCAGGTGTGTTCCTGGCCGAGAGCGCGCTGCACATGGCGGGCCTGGCTGAGTACCCCATGCAGGGAGAGCTGGCCTCTGCCATCAGCTCCGGCAAGAAGAAGCGGAAACGCTGCGGCATGTGCGCGCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCAGCAGTTGTAGGAATCGAAAGACTGGCCATCAGATTTGCAAATTCAGAAAATGTGAGGAACTCAAAAAGAAGCCTTCCGCTGCTCTGGAG

CircID	chr5:139680364\|139681447
ORF Type	ORF2
Protein Length	155
Nucleotide Length	465
Protein Sequence	MASLSIPTTAALLAVDAPPAGRAHAAAFPLLLAGADGRGQLSLHGVLSQARHVQRALGQEHTCRGHNEEAWVDGESAQVGEVGLAIEGFGTCHSLHVRQASTRLAHQREMLLHHALQHLCGLRKLLQRQLSLGCQLRGPLCLAQQAGHSTTFVL*
Nucleotide Sequence	ATGGCCAGTCTTTCGATTCCTACAACTGCTGCACTGCTCGCAGTTGATGCGCCGCCGGCAGGGCGCGCACATGCCGCAGCGTTTCCGCTTCTTCTTGCCGGAGCTGATGGCAGAGGCCAGCTCTCCCTGCATGGGGTACTCAGCCAGGCCCGCCATGTGCAGCGCGCTCTCGGCCAGGAACACACCTGCCGGGGTCATAATGAAGAGGCCTGGGTTGATGGGGAAAGCGCCCAGGTAGGGGAAGTCGGACTGGCCATTGAGGGCTTCGGCACCTGCCACAGCCTCCATGTCAGGCAGGCCAGCACCCGCCTCGCTCATCAGCGGGAGATGCTCCTGCACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCTGCCAGCTCCGTGGCCCGCTCTGCCTTGCTCAGCAGGCTGGCCACAGCACCACTTTTGTGCTTTGA

CircID	chr5:139680364\|139681447
ORF Type	ORF3
Protein Length	118
Nucleotide Length	354
Protein Sequence	MIPLLFRRSGGGVSSATEAGAAAATTALLSAAPAFGPLLPLPPLPLVLLLLLPPASWEPPPRLDMVGPRPRPHCRGSLPTAEGPQTRTWPCCPQQRCLVGLAAQGRHMVRCPGGNVFT
Nucleotide Sequence	ATGATACCGCTCTTGTTCCGACGCTCGGGGGGTGGTGTGTCATCTGCCACTGAGGCTGGTGCGGCGGCAGCCACCACTGCACTCTTGTCTGCTGCTCCTGCCTTTGGGCCACTGCTGCCACTGCCACCGCTGCCATTGGTGCTGCTGCTGCTACTGCCGCCGGCATCCTGGGAGCCACCGCCGAGGCTCGACATGGTGGGGCCGAGGCCCAGACCCCACTGCAGAGGGAGCCTGCCAACTGCCGAGGGTCCACAGACCAGGACCTGGCCCTGCTGCCCACAACAGAGATGCCTGGTGGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTGGAAATGTCTTCACT

CircID	chr5:139680364\|139681447
ORF Type	ORF4
Protein Length	112
Nucleotide Length	336
Protein Sequence	MSGRPAPASLISGRCSCTTRFSISVDCANCCSVSCPSAASSVARSALLSRLATAPLLCFEVGLLLSTAMAAARSCPLANREAAAAAAVALSADSPPIMLPPPLPPLLPKEE*
Nucleotide Sequence	ATGTCAGGCAGGCCAGCACCCGCCTCGCTCATCAGCGGGAGATGCTCCTGCACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCTGCCAGCTCCGTGGCCCGCTCTGCCTTGCTCAGCAGGCTGGCCACAGCACCACTTTTGTGCTTTGAGGTAGGGTTGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATTGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTTGTCAGCAGACTCTCCGCCCATCATGCTGCCACCGCCACTACCACCACTGCTGCCAAAAGAAGAGTAG

CircID	chr5:139680364\|139681447
ORF Type	ORF5
Protein Length	87
Nucleotide Length	261
Protein Sequence	MPAAVAAAAPMAAVAVAAVAQRQEQQTRVQWWLPPHQPQWQMTHHPPSVGTRAVSSVSPSTRACAAPARSPTTLLLAAVVVVAVAA*
Nucleotide Sequence	ATGCCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCCGCACCAGCCTCAGTGGCAGATGACACACCACCCCCCGAGCGTCGGAACAAGAGCGGTATCATCAGTGAGCCCCTCAACAAGAGCCTGCGCCGCTCCCGCCCGCTCTCCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCGGTGGCAGCATGA

CircID	chr5:139680364\|139681447
ORF Type	ORF6
Protein Length	72
Nucleotide Length	216
Protein Sequence	MPIGQQGGSGCSRSGLVSRLSAHHAATATTTTAAKRRVVGERAGAAQALVEGLTDDTALVPTLGGWCVICH*
Nucleotide Sequence	ATGCCCATTGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTTGTCAGCAGACTCTCCGCCCATCATGCTGCCACCGCCACTACCACCACTGCTGCCAAAAGAAGAGTAGTGGGAGAGCGGGCGGGAGCGGCGCAGGCTCTTGTTGAGGGGCTCACTGATGATACCGCTCTTGTTCCGACGCTCGGGGGGTGGTGTGTCATCTGCCACTGA

CircID	chr5:139680364\|139681447
ORF Type	ORF7
Protein Length	64
Nucleotide Length	192
Protein Sequence	MRRRQGAHMPQRFRFFLPELMAEASSPCMGYSARPAMCSALSARNTPAGVIMKRPGLMGKAPR*
Nucleotide Sequence	ATGCGCCGCCGGCAGGGCGCGCACATGCCGCAGCGTTTCCGCTTCTTCTTGCCGGAGCTGATGGCAGAGGCCAGCTCTCCCTGCATGGGGTACTCAGCCAGGCCCGCCATGTGCAGCGCGCTCTCGGCCAGGAACACACCTGCCGGGGTCATAATGAAGAGGCCTGGGTTGATGGGGAAAGCGCCCAGGTAG

CircID	chr5:139680364\|139681447
ORF Type	ORF8
Protein Length	107
Nucleotide Length	321
Protein Sequence	VVCHLPLRLVRRQPPLHSCLLLLPLGHCCHCHRCHWCCCCYCRRHPGSHRRGSTWWGRGPDPTAEGACQLPRVHRPGPGPAAHNRDAWWASLLRAGTWSGVQVEMSS
Nucleotide Sequence	GTGGTGTGTCATCTGCCACTGAGGCTGGTGCGGCGGCAGCCACCACTGCACTCTTGTCTGCTGCTCCTGCCTTTGGGCCACTGCTGCCACTGCCACCGCTGCCATTGGTGCTGCTGCTGCTACTGCCGCCGGCATCCTGGGAGCCACCGCCGAGGCTCGACATGGTGGGGCCGAGGCCCAGACCCCACTGCAGAGGGAGCCTGCCAACTGCCGAGGGTCCACAGACCAGGACCTGGCCCTGCTGCCCACAACAGAGATGCCTGGTGGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTGGAAATGTCTTCA

CircID	chr5:139680364\|139681447
ORF Type	ORF9
Protein Length	81
Nucleotide Length	243
Protein Sequence	VCSWPRARCTWRAWLSTPCRESWPLPSAPARRSGNAAACARPAGGASTASSAAVVGIERLAIRFANSENVRNSKRSLPLLW
Nucleotide Sequence	GTGTGTTCCTGGCCGAGAGCGCGCTGCACATGGCGGGCCTGGCTGAGTACCCCATGCAGGGAGAGCTGGCCTCTGCCATCAGCTCCGGCAAGAAGAAGCGGAAACGCTGCGGCATGTGCGCGCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCAGCAGTTGTAGGAATCGAAAGACTGGCCATCAGATTTGCAAATTCAGAAAATGTGAGGAACTCAAAAAGAAGCCTTCCGCTGCTCTGG

CircID	chr5:139680364\|139681447
ORF Type	ORF10
Protein Length	63
Nucleotide Length	189
Protein Sequence	GCFCPPPWPPPGHAHWPTGRQRLQPQWPCQQTLRPSCCHRHYHHCCQKKSSGRAGGSGAGSC*
Nucleotide Sequence	GGTTGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATTGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTTGTCAGCAGACTCTCCGCCCATCATGCTGCCACCGCCACTACCACCACTGCTGCCAAAAGAAGAGTAGTGGGAGAGCGGGCGGGAGCGGCGCAGGCTCTTGTTGA

CircID	chr5:139680364\|139681447
ORF Type	ORF11
Protein Length	57
Nucleotide Length	171
Protein Sequence	VPALSSEAHQASLLWAAGPGPGLWTLGSWQAPSAVGSGPRPHHVEPRRWLPGCRRQ*
Nucleotide Sequence	GTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTGGACCCTCGGCAGTTGGCAGGCTCCCTCTGCAGTGGGGTCTGGGCCTCGGCCCCACCATGTCGAGCCTCGGCGGTGGCTCCCAGGATGCCGGCGGCAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:139680364\|139681447	U2AF2	3	1	0
chr5:139680364\|139681447	MOV10	1	0	0
chr5:139680364\|139681447	ELAVL1	1	0	0
chr5:139680364\|139681447	SF3B4	1	0	0
chr5:139680364\|139681447	PRPF8	0	3	0
chr5:139680364\|139681447	UPF1	0	4	0
chr5:139680364\|139681447	TAF15	0	1	0
chr5:139680364\|139681447	FMR1	1	0	3
chr5:139680364\|139681447	FUS	0	2	1
chr5:139680364\|139681447	QKI	0	0	3
chr5:139680364\|139681447	SRSF1	0	0	1
chr5:139680364\|139681447	NOP56	0	1	1
chr5:139680364\|139681447	DDX54	5	2	14
chr5:139680364\|139681447	SF3A3	1	0	0
chr5:139680364\|139681447	PTBP1	0	1	0
chr5:139680364\|139681447	HNRNPC	6	0	0
chr5:139680364\|139681447	DDX3X	1	0	2
chr5:139680364\|139681447	LARP7	1	1	0
chr5:139680364\|139681447	MSI2	0	0	3
chr5:139680364\|139681447	MSI1	0	1	0
chr5:139680364\|139681447	LIN28B	1	0	1
chr5:139680364\|139681447	FXR1	0	0	1
chr5:139680364\|139681447	FXR2	0	0	4
chr5:139680364\|139681447	IGF2BP2	1	3	11
chr5:139680364\|139681447	NPM1	1	0	0
chr5:139680364\|139681447	TARDBP	1	1	1
chr5:139680364\|139681447	CSTF2T	3	0	4
chr5:139680364\|139681447	FBL	0	0	2
chr5:139680364\|139681447	AGO1	0	0	1
chr5:139680364\|139681447	EIF4A3	2	5	9
chr5:139680364\|139681447	AGO2	0	1	5

CircRNA Information