CircRNA Information

General Information
circRNA Basic Information
CircID chr5:140705663|140705827
Strand +
CircType exon
Host Gene ENSG00000146007.9;
Algorism CIRI2;
Sequence CCCCTACTACACACACACACACGCAAAGTTAGGTCCAGCATAGGCCAAAGTCAGGCCAAGCACAGAAAGCCTCAGTAACTCTTCTTGGTGGAACCAAAGCCAGAGAAGCCCATCACAGCTGCCATCTCATCGTCCTCCTCAAATGTCAAGTCCTCCTCAGCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:140705663|140705827 hsa-miR-143-5p 0 0 1
chr5:140705663|140705827 hsa-miR-143-3p 0 0 1
chr5:140705663|140705827 hsa-miR-149-5p 0 0 1
chr5:140705663|140705827 hsa-miR-149-3p 0 0 1
chr5:140705663|140705827 hsa-miR-326 0 0 1
chr5:140705663|140705827 hsa-miR-489-5p 0 0 1
chr5:140705663|140705827 hsa-miR-489-3p 0 0 1
chr5:140705663|140705827 hsa-miR-492 0 0 1
chr5:140705663|140705827 hsa-miR-636 0 0 1
chr5:140705663|140705827 hsa-miR-659-5p 0 0 1
chr5:140705663|140705827 hsa-miR-659-3p 0 0 1
chr5:140705663|140705827 hsa-miR-942-5p 0 0 1
chr5:140705663|140705827 hsa-miR-942-3p 0 0 1
chr5:140705663|140705827 hsa-miR-1287-5p 0 0 1
chr5:140705663|140705827 hsa-miR-1287-3p 0 0 1
chr5:140705663|140705827 hsa-miR-1304-5p 0 0 1
chr5:140705663|140705827 hsa-miR-1304-3p 0 0 1
chr5:140705663|140705827 hsa-miR-1224-5p 1 0 1
chr5:140705663|140705827 hsa-miR-885-3p 0 0 1
chr5:140705663|140705827 hsa-miR-485-5p 0 0 1
chr5:140705663|140705827 hsa-miR-330-5p 0 0 1
chr5:140705663|140705827 hsa-miR-9 0 0 1
chr5:140705663|140705827 hsa-miR-218 0 0 1
chr5:140705663|140705827 hsa-miR-604 1 0 0
chr5:140705663|140705827 hsa-miR-612 1 0 0
chr5:140705663|140705827 hsa-miR-762 1 0 0
chr5:140705663|140705827 hsa-miR-2113 1 1 0
chr5:140705663|140705827 hsa-miR-765 1 0 0
chr5:140705663|140705827 hsa-miR-297 1 0 0
chr5:140705663|140705827 hsa-miR-1272 1 0 0
chr5:140705663|140705827 hsa-miR-3131 1 0 0
chr5:140705663|140705827 hsa-miR-3132 1 0 0
chr5:140705663|140705827 hsa-miR-3188 0 1 0
chr5:140705663|140705827 hsa-miR-4265 1 0 0
chr5:140705663|140705827 hsa-miR-4440 1 0 0
chr5:140705663|140705827 hsa-miR-4455 1 0 0
chr5:140705663|140705827 hsa-miR-3135b 1 0 0
chr5:140705663|140705827 hsa-miR-4467 1 0 0
chr5:140705663|140705827 hsa-miR-4478 1 0 0
chr5:140705663|140705827 hsa-miR-4492 1 0 0
chr5:140705663|140705827 hsa-miR-4498 1 0 0
chr5:140705663|140705827 hsa-miR-4505 1 0 0
chr5:140705663|140705827 hsa-miR-4515 1 0 0
chr5:140705663|140705827 hsa-miR-4535 1 1 0
chr5:140705663|140705827 hsa-miR-1587 1 0 0
chr5:140705663|140705827 hsa-miR-4647 0 1 0
chr5:140705663|140705827 hsa-miR-4648 1 0 0
chr5:140705663|140705827 hsa-miR-4651 1 0 0
chr5:140705663|140705827 hsa-miR-4656 1 1 0
chr5:140705663|140705827 hsa-miR-4663 1 0 0
chr5:140705663|140705827 hsa-miR-4675 1 0 0
chr5:140705663|140705827 hsa-miR-4689 1 1 0
chr5:140705663|140705827 hsa-miR-4721 1 0 0
chr5:140705663|140705827 hsa-miR-4739 1 0 0
chr5:140705663|140705827 hsa-miR-4741 1 0 0
chr5:140705663|140705827 hsa-miR-4751 1 0 0
chr5:140705663|140705827 hsa-miR-4784 1 0 0
chr5:140705663|140705827 hsa-miR-5194 1 0 0
chr5:140705663|140705827 hsa-miR-5698 1 0 0
chr5:140705663|140705827 hsa-miR-5787 1 0 0
chr5:140705663|140705827 hsa-miR-6076 1 0 0
chr5:140705663|140705827 hsa-miR-6088 1 0 0
chr5:140705663|140705827 hsa-miR-6860 1 0 0
chr5:140705663|140705827 hsa-miR-7974 1 1 0
chr5:140705663|140705827 hsa-miR-8077 1 0 0
chr5:140705663|140705827 hsa-miR-8083 1 1 0
chr5:140705663|140705827 hsa-miR-8089 1 0 0
chr5:140705663|140705827 hsa-miR-12119 0 1 0
chr5:140705663|140705827 hsa-miR-6734-5p 1 1 0
chr5:140705663|140705827 hsa-miR-6765-5p 1 0 0
chr5:140705663|140705827 hsa-miR-7106-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6825-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6894-5p 1 1 0
chr5:140705663|140705827 hsa-miR-4687-3p 1 0 0
chr5:140705663|140705827 hsa-miR-218-1-3p 0 1 0
chr5:140705663|140705827 hsa-miR-6728-5p 1 0 0
chr5:140705663|140705827 hsa-miR-8071 1 0 0
chr5:140705663|140705827 hsa-miR-766-5p 1 0 0
chr5:140705663|140705827 hsa-miR-5187-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6757-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6880-5p 1 0 0
chr5:140705663|140705827 hsa-miR-7847-3p 1 0 0
chr5:140705663|140705827 hsa-miR-4695-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6867-5p 1 1 0
chr5:140705663|140705827 hsa-miR-4653-3p 1 0 0
chr5:140705663|140705827 hsa-miR-4709-3p 1 0 0
chr5:140705663|140705827 hsa-miR-7154-3p 1 1 0
chr5:140705663|140705827 hsa-miR-7160-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6721-5p 1 0 0
chr5:140705663|140705827 hsa-miR-197-5p 1 0 0
chr5:140705663|140705827 hsa-miR-218-5p 0 1 0
chr5:140705663|140705827 hsa-miR-3180-3p 1 0 0
chr5:140705663|140705827 hsa-miR-6829-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6798-5p 1 0 0
chr5:140705663|140705827 hsa-miR-3150b-3p 1 0 0
chr5:140705663|140705827 hsa-miR-6821-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6815-3p 0 1 0
chr5:140705663|140705827 hsa-miR-5088-5p 1 0 0
chr5:140705663|140705827 hsa-miR-1229-5p 1 0 0
chr5:140705663|140705827 hsa-miR-296-3p 1 0 0
chr5:140705663|140705827 hsa-miR-6771-5p 1 0 0
chr5:140705663|140705827 hsa-miR-877-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4446-3p 1 1 0
chr5:140705663|140705827 hsa-miR-6824-5p 1 0 0
chr5:140705663|140705827 hsa-miR-7162-3p 1 0 0
chr5:140705663|140705827 hsa-miR-574-5p 1 1 0
chr5:140705663|140705827 hsa-miR-664b-5p 1 0 0
chr5:140705663|140705827 hsa-miR-3191-3p 1 0 0
chr5:140705663|140705827 hsa-miR-1914-5p 0 1 0
chr5:140705663|140705827 hsa-miR-6770-3p 1 0 0
chr5:140705663|140705827 hsa-miR-5197-3p 0 1 0
chr5:140705663|140705827 hsa-miR-329-5p 0 1 0
chr5:140705663|140705827 hsa-miR-4679 0 1 0
chr5:140705663|140705827 hsa-miR-10400-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4763-3p 1 0 0
chr5:140705663|140705827 hsa-miR-6787-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6865-5p 1 0 0
chr5:140705663|140705827 hsa-miR-5001-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6756-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6819-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6851-5p 1 0 0
chr5:140705663|140705827 hsa-miR-11181-3p 1 0 0
chr5:140705663|140705827 hsa-miR-1249-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6763-5p 1 0 0
chr5:140705663|140705827 hsa-miR-7111-5p 1 0 0
chr5:140705663|140705827 hsa-miR-3620-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4632-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4649-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6729-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6735-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6794-5p 1 1 0
chr5:140705663|140705827 hsa-miR-6846-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6848-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6858-5p 1 1 0
chr5:140705663|140705827 hsa-miR-4758-5p 1 0 0
chr5:140705663|140705827 hsa-miR-365a-5p 1 0 0
chr5:140705663|140705827 hsa-miR-365b-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4665-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4700-5p 1 0 0
chr5:140705663|140705827 hsa-miR-3173-3p 1 0 0
chr5:140705663|140705827 hsa-miR-3679-5p 1 0 0
chr5:140705663|140705827 hsa-miR-4716-3p 1 0 0
chr5:140705663|140705827 hsa-miR-4667-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6790-5p 1 0 0
chr5:140705663|140705827 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr5:140705663|140705827
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MVEPKPEKPITAAISSSSSNVKSSSAL
Nucleotide Sequence TTGGTGGAACCAAAGCCAGAGAAGCCCATCACAGCTGCCATCTCATCGTCCTCCTCAAATGTCAAGTCCTCCTCAGCCCTC
CircID chr5:140705663|140705827
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MTFEEDDEMAAVMGFSGFGSTKKSY
Nucleotide Sequence TTGACATTTGAGGAGGACGATGAGATGGCAGCTGTGATGGGCTTCTCTGGCTTTGGTTCCACCAAGAAGAGTTACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab