CircRNA Information

General Information
circRNA Basic Information
CircID chr5:141512270|141512457
Strand +
CircType exon
Host Gene ENSG00000204956.5;
Algorism CIRI2;
Sequence CTGGCAAGGTGAAGGACTGAGGCTTCAGGAGGGCAGGGGCCCTGTTGAAGAAGCCCCATCCTGGGCTGAGACTTTCTGTTCATTTGGTCCCTGCCCTAGCTCCCTGCCTCCCCAACCCAGGGACTAAGAATGGCCTGGCTGGCCCACCCTTCCTGCTGGGGCTCCGCTGACCCTTCCACCAGTGGCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:141512270|141512457 hsa-miR-205-5p 0 0 1
chr5:141512270|141512457 hsa-miR-205-3p 0 0 1
chr5:141512270|141512457 hsa-miR-214-5p 0 0 1
chr5:141512270|141512457 hsa-miR-214-3p 0 0 1
chr5:141512270|141512457 hsa-miR-412-5p 0 0 1
chr5:141512270|141512457 hsa-miR-412-3p 0 0 1
chr5:141512270|141512457 hsa-miR-650 0 1 1
chr5:141512270|141512457 hsa-miR-421 0 0 1
chr5:141512270|141512457 hsa-miR-541-5p 0 0 1
chr5:141512270|141512457 hsa-miR-541-3p 0 0 1
chr5:141512270|141512457 hsa-miR-920 0 1 1
chr5:141512270|141512457 hsa-miR-939-5p 0 0 1
chr5:141512270|141512457 hsa-miR-939-3p 0 0 1
chr5:141512270|141512457 hsa-miR-940 0 0 1
chr5:141512270|141512457 hsa-miR-1227-5p 0 0 1
chr5:141512270|141512457 hsa-miR-1227-3p 0 0 1
chr5:141512270|141512457 hsa-miR-1202 0 0 1
chr5:141512270|141512457 hsa-miR-1827 0 0 1
chr5:141512270|141512457 hsa-miR-1225-3p 0 0 1
chr5:141512270|141512457 hsa-miR-296-5p 0 1 1
chr5:141512270|141512457 hsa-miR-654-5p 0 1 1
chr5:141512270|141512457 hsa-miR-1207-5p 1 1 1
chr5:141512270|141512457 hsa-miR-455-3p 0 0 1
chr5:141512270|141512457 hsa-miR-923 0 0 1
chr5:141512270|141512457 hsa-miR-661 1 0 0
chr5:141512270|141512457 hsa-miR-663a 1 0 0
chr5:141512270|141512457 hsa-miR-762 1 1 0
chr5:141512270|141512457 hsa-miR-1976 0 1 0
chr5:141512270|141512457 hsa-miR-3147 1 0 0
chr5:141512270|141512457 hsa-miR-3196 1 0 0
chr5:141512270|141512457 hsa-miR-4270 1 1 0
chr5:141512270|141512457 hsa-miR-4281 1 0 0
chr5:141512270|141512457 hsa-miR-3646 0 1 0
chr5:141512270|141512457 hsa-miR-4449 1 0 0
chr5:141512270|141512457 hsa-miR-4476 0 1 0
chr5:141512270|141512457 hsa-miR-2392 0 1 0
chr5:141512270|141512457 hsa-miR-4507 1 1 0
chr5:141512270|141512457 hsa-miR-4530 0 1 0
chr5:141512270|141512457 hsa-miR-4651 1 0 0
chr5:141512270|141512457 hsa-miR-4739 0 1 0
chr5:141512270|141512457 hsa-miR-5787 1 0 0
chr5:141512270|141512457 hsa-miR-6090 1 0 0
chr5:141512270|141512457 hsa-miR-6165 0 1 0
chr5:141512270|141512457 hsa-miR-8072 1 0 0
chr5:141512270|141512457 hsa-miR-8089 0 1 0
chr5:141512270|141512457 hsa-miR-12115 1 0 0
chr5:141512270|141512457 hsa-miR-12121 1 0 0
chr5:141512270|141512457 hsa-miR-211-3p 0 1 0
chr5:141512270|141512457 hsa-miR-103a-2-5p 0 1 0
chr5:141512270|141512457 hsa-miR-15a-3p 0 1 0
chr5:141512270|141512457 hsa-miR-6825-5p 1 1 0
chr5:141512270|141512457 hsa-miR-6894-5p 1 0 0
chr5:141512270|141512457 hsa-miR-1972 0 1 0
chr5:141512270|141512457 hsa-miR-210-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6089 1 0 0
chr5:141512270|141512457 hsa-miR-4695-5p 1 1 0
chr5:141512270|141512457 hsa-miR-4722-5p 1 1 0
chr5:141512270|141512457 hsa-miR-6721-5p 0 1 0
chr5:141512270|141512457 hsa-miR-1178-5p 0 1 0
chr5:141512270|141512457 hsa-miR-3190-3p 0 1 0
chr5:141512270|141512457 hsa-miR-6798-5p 1 0 0
chr5:141512270|141512457 hsa-miR-486-3p 1 0 0
chr5:141512270|141512457 hsa-miR-7109-3p 1 1 0
chr5:141512270|141512457 hsa-miR-1226-5p 1 0 0
chr5:141512270|141512457 hsa-miR-3202 0 1 0
chr5:141512270|141512457 hsa-miR-6824-5p 1 0 0
chr5:141512270|141512457 hsa-miR-3162-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6742-3p 0 1 0
chr5:141512270|141512457 hsa-miR-7843-3p 0 1 0
chr5:141512270|141512457 hsa-miR-339-5p 0 1 0
chr5:141512270|141512457 hsa-miR-7160-3p 0 1 0
chr5:141512270|141512457 hsa-miR-7846-3p 0 1 0
chr5:141512270|141512457 hsa-miR-2114-5p 0 1 0
chr5:141512270|141512457 hsa-miR-1910-5p 0 1 0
chr5:141512270|141512457 hsa-miR-4649-3p 1 0 0
chr5:141512270|141512457 hsa-miR-3184-3p 1 1 0
chr5:141512270|141512457 hsa-miR-5584-3p 0 1 0
chr5:141512270|141512457 hsa-miR-3675-5p 0 1 0
chr5:141512270|141512457 hsa-miR-26a-1-3p 0 1 0
chr5:141512270|141512457 hsa-miR-4763-3p 1 1 0
chr5:141512270|141512457 hsa-miR-6893-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6775-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6726-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6743-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6754-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6756-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6803-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6722-3p 1 1 0
chr5:141512270|141512457 hsa-miR-6763-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6808-5p 1 1 0
chr5:141512270|141512457 hsa-miR-6879-5p 1 1 0
chr5:141512270|141512457 hsa-miR-6754-3p 0 1 0
chr5:141512270|141512457 hsa-miR-3620-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6836-5p 0 1 0
chr5:141512270|141512457 hsa-miR-1909-3p 1 1 0
chr5:141512270|141512457 hsa-miR-328-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6735-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6738-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6848-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6858-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6889-5p 0 1 0
chr5:141512270|141512457 hsa-miR-4436b-3p 0 1 0
chr5:141512270|141512457 hsa-miR-6845-5p 1 0 0
chr5:141512270|141512457 hsa-miR-4633-3p 0 1 0
chr5:141512270|141512457 hsa-miR-3940-5p 1 1 0
chr5:141512270|141512457 hsa-miR-7843-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6766-5p 0 1 0
chr5:141512270|141512457 hsa-miR-5591-5p 0 1 0
chr5:141512270|141512457 hsa-miR-6724-5p 1 0 0
chr5:141512270|141512457 hsa-miR-6791-5p 1 1 0
chr5:141512270|141512457 hsa-miR-6801-3p 0 1 0
chr5:141512270|141512457 hsa-miR-6810-3p 0 1 0
chr5:141512270|141512457 hsa-miR-6819-3p 1 0 0
chr5:141512270|141512457 hsa-miR-6823-3p 1 0 0
chr5:141512270|141512457 hsa-miR-3619-5p 0 1 0
chr5:141512270|141512457 hsa-miR-4690-3p 0 1 0
chr5:141512270|141512457 hsa-miR-103a-1-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:141512270|141512457
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MRLQEGRGPVEEAPSWAETFCSFGPCPSSLPPQPRD
Nucleotide Sequence CTGAGGCTTCAGGAGGGCAGGGGCCCTGTTGAAGAAGCCCCATCCTGGGCTGAGACTTTCTGTTCATTTGGTCCCTGCCCTAGCTCCCTGCCTCCCCAACCCAGGGACTAA
CircID chr5:141512270|141512457
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MLKKPHPGLRLSVHLVPALAPCLPNPGTKNGLAGPPFLLGLR
Nucleotide Sequence CTGTTGAAGAAGCCCCATCCTGGGCTGAGACTTTCTGTTCATTTGGTCCCTGCCCTAGCTCCCTGCCTCCCCAACCCAGGGACTAAGAATGGCCTGGCTGGCCCACCCTTCCTGCTGGGGCTCCGCTGA
CircID chr5:141512270|141512457
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MVEGSAEPQQEGWASQAILSPWVGEAGS
Nucleotide Sequence CTGGTGGAAGGGTCAGCGGAGCCCCAGCAGGAAGGGTGGGCCAGCCAGGCCATTCTTAGTCCCTGGGTTGGGGAGGCAGGGAGCTAG
CircID chr5:141512270|141512457
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MNRKSQPRMGLLQQGPCPPEASVLHLA
Nucleotide Sequence ATGAACAGAAAGTCTCAGCCCAGGATGGGGCTTCTTCAACAGGGCCCCTGCCCTCCTGAAGCCTCAGTCCTTCACCTTGCC
CircID chr5:141512270|141512457
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MGWGGRELGQGPNEQKVSAQDGASSTGPLPS
Nucleotide Sequence CTGGGTTGGGGAGGCAGGGAGCTAGGGCAGGGACCAAATGAACAGAAAGTCTCAGCCCAGGATGGGGCTTCTTCAACAGGGCCCCTGCCCTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab