CircRNA Information

General Information
circRNA Basic Information
CircID chr5:141528453|141528812
Strand -
CircType exon
Host Gene ENSG00000131504.14;
Algorism CIRI2;
Sequence CTCGGCTGGCTTTCTCCACATGGGCAAGCTCGTCTGGAAACTTGAGGACATCGGGATAGTCATTCTCACACAACTCAGCCAAGAAGTGTAACAACGTCATCTTCTGATCTGTGGACTTGGTGTCTCGAAGCTTAGAGAAAGAGGAGAAACTGTTAAATCCTGACATGTCCAAGATGGCCTCCTGCCAACACTGAACTCATAGAGGCTACAGCCTTCCTTGTGTTGTCCTGCCCTACCTCTTTGGCTCACCTTACAGAGGAAGCTGATATTGAAGCCAAAAGCACCAGCATTTCTGGAGCCAGCATTCATGTAATTTCCAACAAGCAAGGTAATCTCTAGGAGATTGGAAAAGCTCTCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:141528453|141528812 hsa-let-7b-5p 0 0 1
chr5:141528453|141528812 hsa-let-7b-3p 0 0 1
chr5:141528453|141528812 hsa-let-7c-5p 0 0 1
chr5:141528453|141528812 hsa-let-7c-3p 0 0 1
chr5:141528453|141528812 hsa-let-7d-5p 0 0 1
chr5:141528453|141528812 hsa-let-7d-3p 0 0 1
chr5:141528453|141528812 hsa-let-7e-5p 0 0 1
chr5:141528453|141528812 hsa-let-7e-3p 0 0 1
chr5:141528453|141528812 hsa-miR-18a-5p 0 0 1
chr5:141528453|141528812 hsa-miR-18a-3p 0 0 1
chr5:141528453|141528812 hsa-miR-98-5p 0 0 1
chr5:141528453|141528812 hsa-miR-98-3p 0 0 1
chr5:141528453|141528812 hsa-miR-212-5p 0 0 1
chr5:141528453|141528812 hsa-miR-212-3p 0 0 1
chr5:141528453|141528812 hsa-let-7g-5p 0 0 1
chr5:141528453|141528812 hsa-let-7g-3p 0 0 1
chr5:141528453|141528812 hsa-let-7i-5p 0 0 1
chr5:141528453|141528812 hsa-let-7i-3p 0 0 1
chr5:141528453|141528812 hsa-miR-132-5p 0 0 1
chr5:141528453|141528812 hsa-miR-132-3p 0 0 1
chr5:141528453|141528812 hsa-miR-149-5p 0 0 1
chr5:141528453|141528812 hsa-miR-149-3p 0 0 1
chr5:141528453|141528812 hsa-miR-383-5p 0 0 1
chr5:141528453|141528812 hsa-miR-383-3p 0 0 1
chr5:141528453|141528812 hsa-miR-18b-5p 0 0 1
chr5:141528453|141528812 hsa-miR-18b-3p 0 0 1
chr5:141528453|141528812 hsa-miR-432-5p 0 0 1
chr5:141528453|141528812 hsa-miR-432-3p 0 0 1
chr5:141528453|141528812 hsa-miR-571 0 0 1
chr5:141528453|141528812 hsa-miR-580-5p 0 0 1
chr5:141528453|141528812 hsa-miR-580-3p 0 0 1
chr5:141528453|141528812 hsa-miR-583 0 1 1
chr5:141528453|141528812 hsa-miR-647 0 0 1
chr5:141528453|141528812 hsa-miR-1286 0 0 1
chr5:141528453|141528812 hsa-miR-525-5p 0 0 1
chr5:141528453|141528812 hsa-miR-1207-5p 1 0 1
chr5:141528453|141528812 hsa-miR-520a-5p 0 0 1
chr5:141528453|141528812 hsa-miR-516a-3p 0 1 1
chr5:141528453|141528812 hsa-miR-138 0 0 1
chr5:141528453|141528812 hsa-let-7a 0 0 1
chr5:141528453|141528812 hsa-let-7f 0 0 1
chr5:141528453|141528812 hsa-miR-147 0 0 1
chr5:141528453|141528812 hsa-miR-219-1-3p 0 0 1
chr5:141528453|141528812 hsa-miR-1183 1 0 0
chr5:141528453|141528812 hsa-miR-2110 0 1 0
chr5:141528453|141528812 hsa-miR-3137 0 1 0
chr5:141528453|141528812 hsa-miR-3141 1 0 0
chr5:141528453|141528812 hsa-miR-3147 1 0 0
chr5:141528453|141528812 hsa-miR-4253 1 0 0
chr5:141528453|141528812 hsa-miR-3612 1 0 0
chr5:141528453|141528812 hsa-miR-4436a 0 1 0
chr5:141528453|141528812 hsa-miR-4458 0 1 0
chr5:141528453|141528812 hsa-miR-4531 0 1 0
chr5:141528453|141528812 hsa-miR-4657 0 1 0
chr5:141528453|141528812 hsa-miR-4739 1 0 0
chr5:141528453|141528812 hsa-miR-5680 0 1 0
chr5:141528453|141528812 hsa-miR-6086 1 0 0
chr5:141528453|141528812 hsa-miR-6125 1 0 0
chr5:141528453|141528812 hsa-miR-7150 0 1 0
chr5:141528453|141528812 hsa-miR-8077 0 1 0
chr5:141528453|141528812 hsa-miR-138-5p 0 1 0
chr5:141528453|141528812 hsa-miR-7106-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6089 1 0 0
chr5:141528453|141528812 hsa-miR-6807-5p 0 1 0
chr5:141528453|141528812 hsa-miR-4695-5p 1 0 0
chr5:141528453|141528812 hsa-miR-4722-5p 1 1 0
chr5:141528453|141528812 hsa-miR-6890-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6721-5p 0 1 0
chr5:141528453|141528812 hsa-miR-197-5p 1 0 0
chr5:141528453|141528812 hsa-miR-1915-5p 1 0 0
chr5:141528453|141528812 hsa-miR-4753-3p 0 1 0
chr5:141528453|141528812 hsa-miR-486-3p 1 1 0
chr5:141528453|141528812 hsa-miR-3691-3p 0 1 0
chr5:141528453|141528812 hsa-miR-6786-5p 1 0 0
chr5:141528453|141528812 hsa-miR-1229-5p 1 0 0
chr5:141528453|141528812 hsa-miR-885-3p 1 0 0
chr5:141528453|141528812 hsa-miR-3074-3p 0 1 0
chr5:141528453|141528812 hsa-miR-296-3p 1 0 0
chr5:141528453|141528812 hsa-miR-6771-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6823-5p 1 0 0
chr5:141528453|141528812 hsa-miR-4732-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6830-5p 0 1 0
chr5:141528453|141528812 hsa-miR-937-5p 1 0 0
chr5:141528453|141528812 hsa-miR-7112-5p 1 0 0
chr5:141528453|141528812 hsa-miR-3180-5p 0 1 0
chr5:141528453|141528812 hsa-miR-3140-3p 0 1 0
chr5:141528453|141528812 hsa-miR-4763-3p 1 0 0
chr5:141528453|141528812 hsa-miR-5001-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6743-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6722-3p 1 0 0
chr5:141528453|141528812 hsa-miR-6879-5p 1 1 0
chr5:141528453|141528812 hsa-miR-7111-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6780b-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6862-5p 1 0 0
chr5:141528453|141528812 hsa-miR-328-5p 1 0 0
chr5:141528453|141528812 hsa-miR-4632-5p 1 0 0
chr5:141528453|141528812 hsa-miR-6735-5p 1 1 0
chr5:141528453|141528812 hsa-miR-6795-5p 1 0 0
chr5:141528453|141528812 hsa-miR-4436b-3p 0 1 0
chr5:141528453|141528812 hsa-miR-6773-5p 1 0 0
chr5:141528453|141528812 hsa-miR-4757-5p 1 1 0
chr5:141528453|141528812 hsa-miR-9851-5p 1 0 0
chr5:141528453|141528812 hsa-miR-9902 0 1 0
chr5:141528453|141528812 hsa-miR-516b-3p 0 1 0
chr5:141528453|141528812 hsa-miR-6502-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:141528453|141528812
ORF Type ORF1
Protein Length 59
Nucleotide Length 180
Protein Sequence MTCPRWPPANTELIEATAFLVLSCPTSLAHLTEEADIEAKSTSISGASIHVISNKQGNL
Nucleotide Sequence CTGACATGTCCAAGATGGCCTCCTGCCAACACTGAACTCATAGAGGCTACAGCCTTCCTTGTGTTGTCCTGCCCTACCTCTTTGGCTCACCTTACAGAGGAAGCTGATATTGAAGCCAAAAGCACCAGCATTTCTGGAGCCAGCATTCATGTAATTTCCAACAAGCAAGGTAATCTCTAG
CircID chr5:141528453|141528812
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MCCPALPLWLTLQRKLILKPKAPAFLEPAFM
Nucleotide Sequence TTGTGTTGTCCTGCCCTACCTCTTTGGCTCACCTTACAGAGGAAGCTGATATTGAAGCCAAAAGCACCAGCATTTCTGGAGCCAGCATTCATGTAA
CircID chr5:141528453|141528812
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MVSRSLEKEEKLLNPDMSKMASCQH
Nucleotide Sequence TTGGTGTCTCGAAGCTTAGAGAAAGAGGAGAAACTGTTAAATCCTGACATGTCCAAGATGGCCTCCTGCCAACACTGA
CircID chr5:141528453|141528812
ORF Type ORF4
Protein Length 76
Nucleotide Length 231
Protein Sequence MLVGNYMNAGSRNAGAFGFNISFLCKVSQRGRAGQHKEGCSLYEFSVGRRPSWTCQDLTVSPLSLSFETPSPQIRR
Nucleotide Sequence TTGCTTGTTGGAAATTACATGAATGCTGGCTCCAGAAATGCTGGTGCTTTTGGCTTCAATATCAGCTTCCTCTGTAAGGTGAGCCAAAGAGGTAGGGCAGGACAACACAAGGAAGGCTGTAGCCTCTATGAGTTCAGTGTTGGCAGGAGGCCATCTTGGACATGTCAGGATTTAACAGTTTCTCCTCTTTCTCTAAGCTTCGAGACACCAAGTCCACAGATCAGAAGATGA
CircID chr5:141528453|141528812
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MSCVRMTIPMSSSFQTSLPMWRKPAE
Nucleotide Sequence CTGAGTTGTGTGAGAATGACTATCCCGATGTCCTCAAGTTTCCAGACGAGCTTGCCCATGTGGAGAAAGCCAGCCGAG
CircID chr5:141528453|141528812
ORF Type ORF6
Protein Length 57
Nucleotide Length 171
Protein Sequence MDMSGFNSFSSFSKLRDTKSTDQKMTLLHFLAELCENDYPDVLKFPDELAHVEKASR
Nucleotide Sequence TTGGACATGTCAGGATTTAACAGTTTCTCCTCTTTCTCTAAGCTTCGAGACACCAAGTCCACAGATCAGAAGATGACGTTGTTACACTTCTTGGCTGAGTTGTGTGAGAATGACTATCCCGATGTCCTCAAGTTTCCAGACGAGCTTGCCCATGTGGAGAAAGCCAGCCGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab