CircNet

General Information

circRNA Basic Information

CircID	chr5:141621200\|141621334
Strand	+
CircType	exon
Host Gene	ENSG00000171720.8;
Algorism	CIRI2;
Sequence	CACATTTGGTTCTCGAACCATCTACCTGCTTTTCCTCTCTCTCCCAAGGCCTGACAATGGTACCTATTAGGGATGAGATACAGACAAGGATAGCTATCTGGGACATTATTGGCAGTGGGCCCTGGAGGCCAGTCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:141621200\|141621334	hsa-miR-185-5p	0	0	1
chr5:141621200\|141621334	hsa-miR-185-3p	0	0	1
chr5:141621200\|141621334	hsa-miR-193b-5p	0	0	1
chr5:141621200\|141621334	hsa-miR-193b-3p	0	0	1
chr5:141621200\|141621334	hsa-miR-589-5p	0	0	1
chr5:141621200\|141621334	hsa-miR-589-3p	0	0	1
chr5:141621200\|141621334	hsa-miR-632	0	0	1
chr5:141621200\|141621334	hsa-miR-1231	0	0	1
chr5:141621200\|141621334	hsa-miR-501-5p	0	0	1
chr5:141621200\|141621334	hsa-miR-362-5p	0	0	1
chr5:141621200\|141621334	hsa-miR-193a-3p	0	1	1
chr5:141621200\|141621334	hsa-miR-3176	0	1	0
chr5:141621200\|141621334	hsa-miR-4298	1	0	0
chr5:141621200\|141621334	hsa-miR-3909	1	0	0
chr5:141621200\|141621334	hsa-miR-3916	0	1	0
chr5:141621200\|141621334	hsa-miR-4515	0	1	0
chr5:141621200\|141621334	hsa-miR-4644	0	1	0
chr5:141621200\|141621334	hsa-miR-4739	1	1	0
chr5:141621200\|141621334	hsa-miR-6090	1	0	0
chr5:141621200\|141621334	hsa-miR-6124	0	1	0
chr5:141621200\|141621334	hsa-miR-8085	0	1	0
chr5:141621200\|141621334	hsa-miR-6734-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-6760-5p	0	1	0
chr5:141621200\|141621334	hsa-miR-939-3p	1	0	0
chr5:141621200\|141621334	hsa-miR-6749-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-3189-3p	0	1	0
chr5:141621200\|141621334	hsa-miR-1225-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-6890-3p	0	1	0
chr5:141621200\|141621334	hsa-miR-6803-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-6788-5p	0	1	0
chr5:141621200\|141621334	hsa-miR-6808-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-7111-5p	1	1	0
chr5:141621200\|141621334	hsa-miR-4728-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-6831-5p	0	1	0
chr5:141621200\|141621334	hsa-miR-3085-5p	1	1	0
chr5:141621200\|141621334	hsa-miR-30c-1-3p	0	1	0
chr5:141621200\|141621334	hsa-miR-6758-5p	0	1	0
chr5:141621200\|141621334	hsa-miR-6856-5p	0	1	0
chr5:141621200\|141621334	hsa-miR-324-3p	1	0	0
chr5:141621200\|141621334	hsa-miR-6837-5p	0	1	0
chr5:141621200\|141621334	hsa-miR-4691-5p	1	0	0
chr5:141621200\|141621334	hsa-miR-3927-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:141621200\|141621334
ORF Type	ORF1
Protein Length	43
Nucleotide Length	129
Protein Sequence	MVLEPSTCFSSLSQGLTMVPIRDEIQTRIAIWDIIGSGPWRPV
Nucleotide Sequence	TTGGTTCTCGAACCATCTACCTGCTTTTCCTCTCTCTCCCAAGGCCTGACAATGGTACCTATTAGGGATGAGATACAGACAAGGATAGCTATCTGGGACATTATTGGCAGTGGGCCCTGGAGGCCAGTC

CircID	chr5:141621200\|141621334
ORF Type	ORF2
Protein Length	27
Nucleotide Length	81
Protein Sequence	MYLIPNRYHCQALGERGKAGRWFENQM
Nucleotide Sequence	CTGTATCTCATCCCTAATAGGTACCATTGTCAGGCCTTGGGAGAGAGAGGAAAAGCAGGTAGATGGTTCGAGAACCAAATG

CircID	chr5:141621200\|141621334
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MPIMSQIAILVCISSLIGTIVRPWEREEKQVDGSRTKC
Nucleotide Sequence	CTGCCAATAATGTCCCAGATAGCTATCCTTGTCTGTATCTCATCCCTAATAGGTACCATTGTCAGGCCTTGGGAGAGAGAGGAAAAGCAGGTAGATGGTTCGAGAACCAAATGT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information