CircRNA Information

General Information
circRNA Basic Information
CircID chr5:141862884|141863053
Strand -
CircType exon
Host Gene ENSG00000156453.12;
Algorism CIRI2;
Sequence TTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGGTCCAGGGACTTGGCAAATCACAGGTCTCTCCCCAGTGGGGAGAGGGCAGGGAGGAGACCACAGAGCACACCCTCCCTTAATCTTCACTCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:141862884|141863053 hsa-miR-185-5p 0 0 1
chr5:141862884|141863053 hsa-miR-185-3p 0 0 1
chr5:141862884|141863053 hsa-miR-504-5p 0 0 1
chr5:141862884|141863053 hsa-miR-504-3p 0 0 1
chr5:141862884|141863053 hsa-miR-555 0 0 1
chr5:141862884|141863053 hsa-miR-608 1 1 1
chr5:141862884|141863053 hsa-miR-939-5p 0 0 1
chr5:141862884|141863053 hsa-miR-939-3p 0 0 1
chr5:141862884|141863053 hsa-miR-940 0 0 1
chr5:141862884|141863053 hsa-miR-1293 0 0 1
chr5:141862884|141863053 hsa-miR-1275 1 0 1
chr5:141862884|141863053 hsa-miR-1321 1 0 1
chr5:141862884|141863053 hsa-miR-125a-3p 1 1 1
chr5:141862884|141863053 hsa-miR-769-5p 0 1 1
chr5:141862884|141863053 hsa-miR-491-5p 0 0 1
chr5:141862884|141863053 hsa-miR-612 1 0 0
chr5:141862884|141863053 hsa-miR-762 1 0 0
chr5:141862884|141863053 hsa-miR-1182 1 0 0
chr5:141862884|141863053 hsa-miR-1202 1 0 0
chr5:141862884|141863053 hsa-miR-1268a 1 0 0
chr5:141862884|141863053 hsa-miR-1538 1 0 0
chr5:141862884|141863053 hsa-miR-2861 1 0 0
chr5:141862884|141863053 hsa-miR-3138 1 0 0
chr5:141862884|141863053 hsa-miR-3147 1 0 0
chr5:141862884|141863053 hsa-miR-1193 1 0 0
chr5:141862884|141863053 hsa-miR-3175 0 1 0
chr5:141862884|141863053 hsa-miR-4308 0 1 0
chr5:141862884|141863053 hsa-miR-4322 1 0 0
chr5:141862884|141863053 hsa-miR-4279 0 1 0
chr5:141862884|141863053 hsa-miR-3665 1 0 0
chr5:141862884|141863053 hsa-miR-1268b 1 0 0
chr5:141862884|141863053 hsa-miR-4425 1 0 0
chr5:141862884|141863053 hsa-miR-4488 1 0 0
chr5:141862884|141863053 hsa-miR-4505 1 0 0
chr5:141862884|141863053 hsa-miR-4507 1 1 0
chr5:141862884|141863053 hsa-miR-4514 1 0 0
chr5:141862884|141863053 hsa-miR-1587 1 0 0
chr5:141862884|141863053 hsa-miR-4651 1 1 0
chr5:141862884|141863053 hsa-miR-4658 1 0 0
chr5:141862884|141863053 hsa-miR-4686 1 0 0
chr5:141862884|141863053 hsa-miR-4706 1 0 0
chr5:141862884|141863053 hsa-miR-4710 1 0 0
chr5:141862884|141863053 hsa-miR-4739 1 1 0
chr5:141862884|141863053 hsa-miR-5572 1 0 0
chr5:141862884|141863053 hsa-miR-5690 0 1 0
chr5:141862884|141863053 hsa-miR-5698 0 1 0
chr5:141862884|141863053 hsa-miR-5787 1 0 0
chr5:141862884|141863053 hsa-miR-6127 0 1 0
chr5:141862884|141863053 hsa-miR-6134 1 0 0
chr5:141862884|141863053 hsa-miR-6745 1 0 0
chr5:141862884|141863053 hsa-miR-6860 1 0 0
chr5:141862884|141863053 hsa-miR-8077 0 1 0
chr5:141862884|141863053 hsa-miR-8085 1 1 0
chr5:141862884|141863053 hsa-miR-8089 0 1 0
chr5:141862884|141863053 hsa-miR-6749-3p 0 1 0
chr5:141862884|141863053 hsa-miR-92a-1-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4731-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6747-5p 1 0 0
chr5:141862884|141863053 hsa-miR-3150a-3p 0 1 0
chr5:141862884|141863053 hsa-miR-6825-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6892-3p 0 1 0
chr5:141862884|141863053 hsa-miR-6799-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6728-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6867-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4709-3p 1 0 0
chr5:141862884|141863053 hsa-miR-6806-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6759-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6721-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6845-3p 0 1 0
chr5:141862884|141863053 hsa-miR-6742-5p 1 0 0
chr5:141862884|141863053 hsa-miR-3151-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6748-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6793-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6732-5p 1 1 0
chr5:141862884|141863053 hsa-miR-3190-3p 1 0 0
chr5:141862884|141863053 hsa-miR-6881-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6782-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6810-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6786-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6835-5p 1 0 0
chr5:141862884|141863053 hsa-miR-7109-5p 1 0 0
chr5:141862884|141863053 hsa-miR-1229-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4640-5p 1 0 0
chr5:141862884|141863053 hsa-miR-1908-5p 1 0 0
chr5:141862884|141863053 hsa-miR-7113-3p 0 1 0
chr5:141862884|141863053 hsa-miR-296-3p 1 0 0
chr5:141862884|141863053 hsa-miR-6771-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6749-5p 0 1 0
chr5:141862884|141863053 hsa-miR-7111-3p 0 1 0
chr5:141862884|141863053 hsa-miR-4787-5p 1 0 0
chr5:141862884|141863053 hsa-miR-3690 0 1 0
chr5:141862884|141863053 hsa-miR-149-3p 0 1 0
chr5:141862884|141863053 hsa-miR-193a-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6824-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6800-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6802-5p 1 0 0
chr5:141862884|141863053 hsa-miR-5584-5p 0 1 0
chr5:141862884|141863053 hsa-miR-1236-3p 0 1 0
chr5:141862884|141863053 hsa-let-7e-5p 1 0 0
chr5:141862884|141863053 hsa-miR-2114-5p 0 1 0
chr5:141862884|141863053 hsa-miR-6867-3p 0 1 0
chr5:141862884|141863053 hsa-miR-6752-3p 0 1 0
chr5:141862884|141863053 hsa-miR-6509-5p 1 0 0
chr5:141862884|141863053 hsa-miR-1207-5p 1 0 0
chr5:141862884|141863053 hsa-miR-1233-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4763-3p 1 0 0
chr5:141862884|141863053 hsa-miR-6778-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6816-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6893-5p 1 1 0
chr5:141862884|141863053 hsa-miR-1343-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6737-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6752-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6756-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6803-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6819-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6842-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6851-5p 1 0 0
chr5:141862884|141863053 hsa-miR-7110-5p 1 1 0
chr5:141862884|141863053 hsa-miR-1249-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6751-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6763-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6779-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6797-5p 0 1 0
chr5:141862884|141863053 hsa-miR-6808-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6879-5p 1 0 0
chr5:141862884|141863053 hsa-miR-7111-5p 1 0 0
chr5:141862884|141863053 hsa-miR-3620-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4728-5p 0 1 0
chr5:141862884|141863053 hsa-miR-5189-5p 1 0 0
chr5:141862884|141863053 hsa-miR-1237-5p 1 0 0
chr5:141862884|141863053 hsa-miR-328-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4726-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4745-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6883-5p 1 1 0
chr5:141862884|141863053 hsa-miR-3187-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4436b-3p 1 0 0
chr5:141862884|141863053 hsa-miR-4758-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4769-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6511a-5p 1 0 0
chr5:141862884|141863053 hsa-miR-3940-5p 1 1 0
chr5:141862884|141863053 hsa-miR-4665-5p 1 0 0
chr5:141862884|141863053 hsa-miR-4700-5p 0 1 0
chr5:141862884|141863053 hsa-miR-6766-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6785-5p 0 1 0
chr5:141862884|141863053 hsa-miR-4667-5p 0 1 0
chr5:141862884|141863053 hsa-miR-6790-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6724-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6791-5p 1 0 0
chr5:141862884|141863053 hsa-miR-6805-3p 1 1 0
chr5:141862884|141863053 hsa-miR-4723-3p 0 1 0
chr5:141862884|141863053 hsa-miR-4756-5p 1 1 0
chr5:141862884|141863053 hsa-miR-6843-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr5:141862884|141863053
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MANHRSLPSGERAGRRPQSTPSLNLHS
Nucleotide Sequence TTGGCAAATCACAGGTCTCTCCCCAGTGGGGAGAGGGCAGGGAGGAGACCACAGAGCACACCCTCCCTTAATCTTCACTCA
CircID chr5:141862884|141863053
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MVQGPGTWQITGLSPVGRGQGGDHRAHPPLIFTQ
Nucleotide Sequence CTGGTCCAGGGTCCAGGGACTTGGCAAATCACAGGTCTCTCCCCAGTGGGGAGAGGGCAGGGAGGAGACCACAGAGCACACCCTCCCTTAATCTTCACTCAG
CircID chr5:141862884|141863053
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MPSPHWGETCDLPSPWTLDQLLGLMGWGW
Nucleotide Sequence CTGCCCTCTCCCCACTGGGGAGAGACCTGTGATTTGCCAAGTCCCTGGACCCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAG
CircID chr5:141862884|141863053
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MWSPPCPLPTGERPVICQVPGPWTSYWALWVGGGRQVSVSGEGNG
Nucleotide Sequence CTGTGGTCTCCTCCCTGCCCTCTCCCCACTGGGGAGAGACCTGTGATTTGCCAAGTCCCTGGACCCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab