CircRNA Information

General Information
circRNA Basic Information
CircID chr5:1462424|1462581
Strand -
CircType exon
Host Gene ENSG00000153395.8;
Algorism CIRI2;
Sequence CCCCGCTCTCAGTGGGATGTGCCCGCGACCCTGGCGCTGGGAGGCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCCTCTCT
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:1462424|1462581 hsa-miR-107 0 0 1
chr5:1462424|1462581 hsa-miR-658 1 1 1
chr5:1462424|1462581 hsa-miR-675-5p 0 0 1
chr5:1462424|1462581 hsa-miR-675-3p 0 0 1
chr5:1462424|1462581 hsa-miR-147b-5p 0 0 1
chr5:1462424|1462581 hsa-miR-147b-3p 0 0 1
chr5:1462424|1462581 hsa-miR-1231 0 1 1
chr5:1462424|1462581 hsa-miR-1205 0 0 1
chr5:1462424|1462581 hsa-miR-1265 0 0 1
chr5:1462424|1462581 hsa-miR-139-3p 1 1 1
chr5:1462424|1462581 hsa-miR-1184 0 0 1
chr5:1462424|1462581 hsa-miR-654-3p 0 0 1
chr5:1462424|1462581 hsa-miR-483-3p 0 1 1
chr5:1462424|1462581 hsa-miR-542-3p 0 0 1
chr5:1462424|1462581 hsa-miR-103 0 0 1
chr5:1462424|1462581 hsa-miR-1185 0 0 1
chr5:1462424|1462581 hsa-miR-638 1 0 0
chr5:1462424|1462581 hsa-miR-151b 1 0 0
chr5:1462424|1462581 hsa-miR-762 1 0 0
chr5:1462424|1462581 hsa-miR-765 1 0 0
chr5:1462424|1462581 hsa-miR-760 1 0 0
chr5:1462424|1462581 hsa-miR-3147 1 0 0
chr5:1462424|1462581 hsa-miR-3154 1 0 0
chr5:1462424|1462581 hsa-miR-3183 0 1 0
chr5:1462424|1462581 hsa-miR-3197 1 0 0
chr5:1462424|1462581 hsa-miR-4299 0 1 0
chr5:1462424|1462581 hsa-miR-4428 0 1 0
chr5:1462424|1462581 hsa-miR-4466 1 0 0
chr5:1462424|1462581 hsa-miR-4505 1 0 0
chr5:1462424|1462581 hsa-miR-4533 0 1 0
chr5:1462424|1462581 hsa-miR-1587 0 1 0
chr5:1462424|1462581 hsa-miR-4656 1 0 0
chr5:1462424|1462581 hsa-miR-4657 1 0 0
chr5:1462424|1462581 hsa-miR-4688 1 0 0
chr5:1462424|1462581 hsa-miR-4689 1 0 0
chr5:1462424|1462581 hsa-miR-4706 1 0 0
chr5:1462424|1462581 hsa-miR-4739 1 0 0
chr5:1462424|1462581 hsa-miR-4741 1 1 0
chr5:1462424|1462581 hsa-miR-4751 1 0 0
chr5:1462424|1462581 hsa-miR-4784 1 1 0
chr5:1462424|1462581 hsa-miR-5091 1 0 0
chr5:1462424|1462581 hsa-miR-6127 1 0 0
chr5:1462424|1462581 hsa-miR-6133 1 0 0
chr5:1462424|1462581 hsa-miR-12115 1 0 0
chr5:1462424|1462581 hsa-miR-6836-3p 0 1 0
chr5:1462424|1462581 hsa-miR-7106-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6894-5p 1 0 0
chr5:1462424|1462581 hsa-miR-4687-3p 1 0 0
chr5:1462424|1462581 hsa-miR-25-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6799-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6804-5p 1 1 0
chr5:1462424|1462581 hsa-miR-6833-5p 0 1 0
chr5:1462424|1462581 hsa-miR-6515-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6880-5p 1 0 0
chr5:1462424|1462581 hsa-miR-7847-3p 1 1 0
chr5:1462424|1462581 hsa-miR-4695-5p 1 0 0
chr5:1462424|1462581 hsa-miR-8069 1 0 0
chr5:1462424|1462581 hsa-miR-3605-5p 1 0 0
chr5:1462424|1462581 hsa-miR-3190-3p 1 1 0
chr5:1462424|1462581 hsa-miR-6827-5p 1 0 0
chr5:1462424|1462581 hsa-miR-4713-5p 0 1 0
chr5:1462424|1462581 hsa-miR-7111-3p 0 1 0
chr5:1462424|1462581 hsa-miR-4787-5p 1 0 0
chr5:1462424|1462581 hsa-miR-149-3p 1 0 0
chr5:1462424|1462581 hsa-miR-6886-5p 1 0 0
chr5:1462424|1462581 hsa-miR-4707-5p 1 0 0
chr5:1462424|1462581 hsa-miR-383-3p 0 1 0
chr5:1462424|1462581 hsa-miR-4746-3p 1 0 0
chr5:1462424|1462581 hsa-miR-28-5p 0 1 0
chr5:1462424|1462581 hsa-miR-6890-3p 0 1 0
chr5:1462424|1462581 hsa-miR-1233-5p 1 0 0
chr5:1462424|1462581 hsa-miR-4763-3p 1 0 0
chr5:1462424|1462581 hsa-miR-6769b-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6778-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6812-5p 1 0 0
chr5:1462424|1462581 hsa-miR-5001-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6803-5p 1 0 0
chr5:1462424|1462581 hsa-miR-10401-5p 1 0 0
chr5:1462424|1462581 hsa-miR-1249-5p 1 1 0
chr5:1462424|1462581 hsa-miR-6751-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6779-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6780a-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6797-5p 1 0 0
chr5:1462424|1462581 hsa-miR-3620-5p 1 1 0
chr5:1462424|1462581 hsa-miR-5196-5p 0 1 0
chr5:1462424|1462581 hsa-miR-6858-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6883-5p 1 0 0
chr5:1462424|1462581 hsa-miR-4697-5p 1 0 0
chr5:1462424|1462581 hsa-miR-939-5p 1 0 0
chr5:1462424|1462581 hsa-miR-6856-5p 0 1 0
chr5:1462424|1462581 hsa-miR-4747-5p 1 1 0
chr5:1462424|1462581 hsa-miR-6876-5p 1 0 0
chr5:1462424|1462581 hsa-miR-3059-5p 0 1 0
chr5:1462424|1462581 hsa-miR-4723-3p 0 1 0
chr5:1462424|1462581 hsa-miR-6769b-3p 0 1 0
chr5:1462424|1462581 hsa-miR-151a-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr5:1462424|1462581
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MALGGSAAERSGVRTAVTRHPHHPPHRTAQRLLPQAKDCGSS
Nucleotide Sequence CTGGCGCTGGGAGGCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCCTCT
CircID chr5:1462424|1462581
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MCPRPWRWEAVLQRGVVSARLSPDILITLRTAQPSVSFHKQKTAAPL
Nucleotide Sequence ATGTGCCCGCGACCCTGGCGCTGGGAGGCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCCTCTC
CircID chr5:1462424|1462581
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MVTAVRTPLLSAALPPSARVAGTSH
Nucleotide Sequence CTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGA
CircID chr5:1462424|1462581
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MWKETLGCAVRRVMRMSGDSRADTTPLCSTASQRQGRGHIPLRAG
Nucleotide Sequence TTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab