CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150126571|150129880
Strand -
CircType exon
Host Gene ENSG00000113721.12;
Algorism CIRI2;
Sequence CAGGGCCAGGATGGCTGAGATCACCACCACCTTAAAGGGCAAGGAGTGTGGCACCACGATGACCTCCTGCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150126571|150129880 hsa-miR-18a-5p 0 0 1
chr5:150126571|150129880 hsa-miR-18a-3p 0 0 1
chr5:150126571|150129880 hsa-miR-107 0 0 1
chr5:150126571|150129880 hsa-miR-328-5p 0 0 1
chr5:150126571|150129880 hsa-miR-328-3p 0 0 1
chr5:150126571|150129880 hsa-miR-18b-5p 0 0 1
chr5:150126571|150129880 hsa-miR-18b-3p 0 0 1
chr5:150126571|150129880 hsa-miR-874-5p 0 0 1
chr5:150126571|150129880 hsa-miR-874-3p 0 0 1
chr5:150126571|150129880 hsa-miR-938 0 0 1
chr5:150126571|150129880 hsa-miR-1227-5p 0 0 1
chr5:150126571|150129880 hsa-miR-1227-3p 0 0 1
chr5:150126571|150129880 hsa-miR-1205 0 0 1
chr5:150126571|150129880 hsa-miR-1291 0 0 1
chr5:150126571|150129880 hsa-miR-1304-5p 0 0 1
chr5:150126571|150129880 hsa-miR-1304-3p 0 0 1
chr5:150126571|150129880 hsa-miR-1250-5p 0 0 1
chr5:150126571|150129880 hsa-miR-1250-3p 0 0 1
chr5:150126571|150129880 hsa-miR-1197 0 0 1
chr5:150126571|150129880 hsa-miR-1184 0 1 1
chr5:150126571|150129880 hsa-miR-502-5p 0 1 1
chr5:150126571|150129880 hsa-miR-876-3p 0 0 1
chr5:150126571|150129880 hsa-miR-483-3p 0 0 1
chr5:150126571|150129880 hsa-miR-323-5p 0 0 1
chr5:150126571|150129880 hsa-miR-103 0 0 1
chr5:150126571|150129880 hsa-miR-608 1 0 0
chr5:150126571|150129880 hsa-miR-639 0 1 0
chr5:150126571|150129880 hsa-miR-4296 0 1 0
chr5:150126571|150129880 hsa-miR-4322 0 1 0
chr5:150126571|150129880 hsa-miR-3652 1 0 0
chr5:150126571|150129880 hsa-miR-4436a 0 1 0
chr5:150126571|150129880 hsa-miR-4651 1 0 0
chr5:150126571|150129880 hsa-miR-4734 1 0 0
chr5:150126571|150129880 hsa-miR-5698 1 0 0
chr5:150126571|150129880 hsa-miR-6127 1 0 0
chr5:150126571|150129880 hsa-miR-6134 0 1 0
chr5:150126571|150129880 hsa-miR-6165 1 1 0
chr5:150126571|150129880 hsa-miR-8064 0 1 0
chr5:150126571|150129880 hsa-miR-134-3p 0 1 0
chr5:150126571|150129880 hsa-miR-4433b-3p 1 0 0
chr5:150126571|150129880 hsa-miR-154-5p 0 1 0
chr5:150126571|150129880 hsa-miR-4665-3p 1 0 0
chr5:150126571|150129880 hsa-miR-3157-5p 0 1 0
chr5:150126571|150129880 hsa-miR-4433a-3p 1 1 0
chr5:150126571|150129880 hsa-miR-6510-5p 1 0 0
chr5:150126571|150129880 hsa-miR-4722-5p 1 1 0
chr5:150126571|150129880 hsa-miR-1915-5p 1 0 0
chr5:150126571|150129880 hsa-miR-6796-5p 1 0 0
chr5:150126571|150129880 hsa-miR-6850-5p 1 0 0
chr5:150126571|150129880 hsa-miR-4640-5p 1 1 0
chr5:150126571|150129880 hsa-miR-4695-3p 0 1 0
chr5:150126571|150129880 hsa-miR-6737-5p 1 0 0
chr5:150126571|150129880 hsa-miR-6803-5p 1 0 0
chr5:150126571|150129880 hsa-miR-6722-3p 1 0 0
chr5:150126571|150129880 hsa-miR-1909-3p 1 0 0
chr5:150126571|150129880 hsa-miR-4726-5p 0 1 0
chr5:150126571|150129880 hsa-miR-3085-5p 0 1 0
chr5:150126571|150129880 hsa-miR-6855-5p 1 0 0
chr5:150126571|150129880 hsa-miR-3064-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr5:150126571|150129880
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MRVLAHSVAQRAAHRQWPIHVLQTQCAHHLKLLL
Nucleotide Sequence CTGCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTC

CircID chr5:150126571|150129880
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MAEITTTLKGKECGTTMTSCVSWPTALRSVQRTDSGRSTCCRRSVLTTSNSC
Nucleotide Sequence ATGGCTGAGATCACCACCACCTTAAAGGGCAAGGAGTGTGGCACCACGATGACCTCCTGCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGC

CircID chr5:150126571|150129880
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MRLQHVDRPLSVRCTLRNAVGQDTQEVIVVPHSLPFKVVVISAILAL
Nucleotide Sequence CTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGTGCCACACTCCTTGCCCTTTAAGGTGGTGGTGATCTCAGCCATCCTGGCCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites