CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150401853|150402022
Strand +
CircType exon
Host Gene ENSG00000019582.13;
Algorism CIRI2;
Sequence AGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150401853|150402022 hsa-miR-198 0 0 1
chr5:150401853|150402022 hsa-miR-432-5p 0 0 1
chr5:150401853|150402022 hsa-miR-432-3p 0 0 1
chr5:150401853|150402022 hsa-miR-581 0 0 1
chr5:150401853|150402022 hsa-miR-588 0 0 1
chr5:150401853|150402022 hsa-miR-609 0 0 1
chr5:150401853|150402022 hsa-miR-650 0 0 1
chr5:150401853|150402022 hsa-miR-661 1 1 1
chr5:150401853|150402022 hsa-miR-873-5p 0 0 1
chr5:150401853|150402022 hsa-miR-873-3p 0 0 1
chr5:150401853|150402022 hsa-miR-615-5p 0 0 1
chr5:150401853|150402022 hsa-miR-542-5p 0 0 1
chr5:150401853|150402022 hsa-miR-296-3p 0 0 1
chr5:150401853|150402022 hsa-miR-485-5p 0 1 1
chr5:150401853|150402022 hsa-miR-339-5p 0 0 1
chr5:150401853|150402022 hsa-miR-188-5p 0 0 1
chr5:150401853|150402022 hsa-miR-1274a 0 0 1
chr5:150401853|150402022 hsa-miR-550 0 0 1
chr5:150401853|150402022 hsa-miR-1274b 0 0 1
chr5:150401853|150402022 hsa-miR-768-5p 0 0 1
chr5:150401853|150402022 hsa-miR-601 1 0 0
chr5:150401853|150402022 hsa-miR-638 1 0 0
chr5:150401853|150402022 hsa-miR-1182 1 0 0
chr5:150401853|150402022 hsa-miR-3135a 0 1 0
chr5:150401853|150402022 hsa-miR-4297 0 1 0
chr5:150401853|150402022 hsa-miR-4253 1 0 0
chr5:150401853|150402022 hsa-miR-4450 1 0 0
chr5:150401853|150402022 hsa-miR-4706 1 0 0
chr5:150401853|150402022 hsa-miR-7155-5p 0 1 0
chr5:150401853|150402022 hsa-miR-6857-5p 1 0 0
chr5:150401853|150402022 hsa-miR-6873-3p 1 1 0
chr5:150401853|150402022 hsa-miR-6845-3p 1 0 0
chr5:150401853|150402022 hsa-miR-1292-5p 1 0 0
chr5:150401853|150402022 hsa-miR-6772-5p 0 1 0
chr5:150401853|150402022 hsa-miR-1343-3p 0 1 0
chr5:150401853|150402022 hsa-miR-6852-5p 0 1 0
chr5:150401853|150402022 hsa-miR-7113-3p 0 1 0
chr5:150401853|150402022 hsa-miR-3667-3p 1 0 0
chr5:150401853|150402022 hsa-miR-6749-5p 1 0 0
chr5:150401853|150402022 hsa-miR-6861-3p 0 1 0
chr5:150401853|150402022 hsa-miR-4787-5p 1 0 0
chr5:150401853|150402022 hsa-miR-4646-3p 1 1 0
chr5:150401853|150402022 hsa-miR-6889-3p 0 1 0
chr5:150401853|150402022 hsa-miR-6867-3p 0 1 0
chr5:150401853|150402022 hsa-miR-208a-5p 0 1 0
chr5:150401853|150402022 hsa-miR-501-5p 0 1 0
chr5:150401853|150402022 hsa-miR-1914-5p 0 1 0
chr5:150401853|150402022 hsa-miR-5088-3p 1 1 0
chr5:150401853|150402022 hsa-miR-6734-3p 0 1 0
chr5:150401853|150402022 hsa-miR-6752-5p 1 0 0
chr5:150401853|150402022 hsa-miR-7107-5p 1 0 0
chr5:150401853|150402022 hsa-miR-320a-5p 0 1 0
chr5:150401853|150402022 hsa-miR-6866-3p 0 1 0
chr5:150401853|150402022 hsa-miR-4749-5p 1 0 0
chr5:150401853|150402022 hsa-miR-6777-5p 1 0 0
chr5:150401853|150402022 hsa-miR-6889-5p 1 0 0
chr5:150401853|150402022 hsa-miR-939-5p 1 0 0
chr5:150401853|150402022 hsa-miR-6855-5p 0 1 0
chr5:150401853|150402022 hsa-miR-6753-3p 1 0 0
chr5:150401853|150402022 hsa-miR-769-3p 1 0 0
chr5:150401853|150402022 hsa-miR-6529-3p 0 1 0
chr5:150401853|150402022 hsa-miR-6884-5p 0 1 0
chr5:150401853|150402022 hsa-miR-6783-3p 0 1 0
chr5:150401853|150402022 hsa-miR-487b-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:150401853|150402022
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MEPCVGGCCDVRNGDLSSFWPLPGTSRP
Nucleotide Sequence TTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCC
CircID chr5:150401853|150402022
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MGVGLSLLPVPSHLVHEPRSWSLVLEAAVMSGTGICLAFGHFLGPHAP
Nucleotide Sequence CTGGGTGTAGGGTTATCCCTTCTCCCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab